DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and opm

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_572994.1 Gene:opm / 32435 FlyBaseID:FBgn0264389 Length:242 Species:Drosophila melanogaster


Alignment Length:233 Identity:48/233 - (20%)
Similarity:88/233 - (37%) Gaps:56/233 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISLALILCVLHSA------CGLYFHISQTERKCFIEEVPDETTVIVNYKV------------ELY 52
            :|:|.:|..:..|      ..:|....:||  |....|....|:...|:|            .|.
  Fly    15 LSIAALLLGVQDAEAYDKEMTVYVDAGKTE--CLYHSVRQGETIDFEYQVIDGGHGDLDISFTLL 77

  Fly    53 DPRSNGFMPSSPGIGMHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQ 117
            ||           ||:          :::|.....:..........|::..| |.||.:.|:...
  Fly    78 DP-----------IGL----------VIVSDFKKPENVHRHEVAKEGDYRFC-FDNSFSMFNRKT 120

  Fly   118 LRVHLDIQ-VGEHAIDYAHVAQKEKLTEL------QLRIRQLLDQVE----QITKEQNYQ---RY 168
            :...|.:: .||.........:.::||.|      .::::.::|.:.    |:||.:..|   |.
  Fly   121 VFFELIVEREGEELQGDTQWNEADELTGLSRDEYYDMKVQDIMDFIGRIRLQLTKARQLQDVLRS 185

  Fly   169 REERFRHTSESTNSRVLWWSLAQTVVLVCMGFWHLFNL 206
            .|.|.|:.:||...:|..||:.|...::.:|...:|.|
  Fly   186 HEARDRNLAESNFQKVNHWSMVQISAMIGVGLIQVFML 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 43/211 (20%)
opmNP_572994.1 EMP24_GP25L 33..227 CDD:426051 44/215 (20%)

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