DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and tmed-10

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_505879.1 Gene:tmed-10 / 179567 WormBaseID:WBGene00009829 Length:204 Species:Caenorhabditis elegans


Alignment Length:202 Identity:59/202 - (29%)
Similarity:98/202 - (48%) Gaps:13/202 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLALILCVLHSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVE 71
            ||.:.|..:..|..|.|::...|:||..||:.....|...|:.      |.|...:.     .:.
 Worm     3 SLVIFLSAIVLAHSLRFYVPPKEKKCLKEEIHKNVVVTGEYEF------SQGIQYTG-----SIH 56

  Fly    72 VRDSDDKIVLSR--VYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDYA 134
            |.|:....:..|  ....:|:.:||:.......||:.::..|...|.:..|.|.::.|..|.:|.
 Worm    57 VTDTRGHTLYKRENFADLKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEAKNYD 121

  Fly   135 HVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLVCMG 199
            .:|:.|||..|::.:|:|.|..:.|||:..:.|.|||..|:|:||||||||:.|:...:.|:.:.
 Worm   122 DIAKAEKLKPLEVELRRLEDMADSITKDFAFMRQREEEMRNTNESTNSRVLYLSIFSMLCLLGLA 186

  Fly   200 FWHLFNL 206
            .|.:..|
 Worm   187 IWQVLFL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 54/187 (29%)
tmed-10NP_505879.1 EMP24_GP25L 16..198 CDD:426051 55/189 (29%)

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