DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and sel-9

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001370673.1 Gene:sel-9 / 179213 WormBaseID:WBGene00004766 Length:203 Species:Caenorhabditis elegans


Alignment Length:206 Identity:54/206 - (26%)
Similarity:90/206 - (43%) Gaps:21/206 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLALILCVLH--SACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMH 69
            ||..||.||.  .|...:.|:...|.:||.:.:...|.:.:.::|     ...||      :.:.
 Worm     3 SLTWILAVLFVTPAASYFIHVDANEEQCFFDRLTSGTKMGLMFEV-----AEGGF------LDID 56

  Fly    70 VEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDI----QVGEHA 130
            |::...|:|.:......|.|:.:|.:|..|.:..| |.|..:..:...:...::|    |....|
 Worm    57 VKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYC-FGNKMSTMTPKAVMFTVEITEPHQQAPGA 120

  Fly   131 IDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVL 195
            ......|...||.|:   :|:|...:..:..||.|...||...|:.:|:|||||:.|:..:..||
 Worm   121 AANQDAADNAKLEEM---VRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVL 182

  Fly   196 VCMGFWHLFNL 206
            |.|....:|.|
 Worm   183 VGMTVGQIFYL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 46/189 (24%)
sel-9NP_001370673.1 EMP24_GP25L 18..198 CDD:426051 47/191 (25%)

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