DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and CHOp24

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_318076.4 Gene:CHOp24 / 1278482 VectorBaseID:AGAMI1_001314 Length:205 Species:Anopheles gambiae


Alignment Length:210 Identity:53/210 - (25%)
Similarity:95/210 - (45%) Gaps:29/210 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FISLALILCVLHSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMH 69
            |:...|:|||: ...|.:..:.....:||.:.....|.:.:     :::....||        :.
Mosquito     7 FLVCFLLLCVV-PIRGYFITVDPHSEECFFDRAEAGTKLGL-----MFETVEGGF--------LD 57

  Fly    70 VEVRDS--DDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGE---- 128
            :|||.|  |.|::......|.|:.:|:::..|.:..| |||..:..:...  |...:::||    
Mosquito    58 IEVRISGPDQKVIYQGEKESSGKYTFSAYETGIYHYC-FSNKMSTLTPKV--VMFSMEIGEAPKG 119

  Fly   129 --HAIDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQ 191
              .|::......    |:|:..||:|...:..|..||:|...|:...|..:|||||||:.||..:
Mosquito   120 TVGAVNEGEAGH----TKLEDMIRELSGTLTSIKHEQDYMHVRDRIHRSINESTNSRVVMWSFFE 180

  Fly   192 TVVLVCMGFWHLFNL 206
            .:||:.|....::.|
Mosquito   181 AIVLIVMTVGQVYYL 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 47/193 (24%)
CHOp24XP_318076.4 None

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