DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX6CL and cox6c

DIOPT Version :10

Sequence 1:NP_001285640.1 Gene:COX6CL / 318868 FlyBaseID:FBgn0051644 Length:90 Species:Drosophila melanogaster
Sequence 2:XP_012820048.2 Gene:cox6c / 496600 XenbaseID:XB-GENE-1001882 Length:112 Species:Xenopus tropicalis


Alignment Length:107 Identity:28/107 - (26%)
Similarity:43/107 - (40%) Gaps:21/107 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ECLRALGQNPTESDVKKFTMQLKPDERVSFEVFL-PIYQAISKQRTAETADDFIEGLRHFDKDAS 97
            |..::||:..|| |.:      :|..:.||...: |.||...|   |......:|..|..|:..|
 Frog   148 EARKSLGEEYTE-DYE------QPRGKGSFPAMITPAYQRAKK---ANQLASQVEYKRGHDERIS 202

  Fly    98 GFISSAELRHLLTTLGEKLGDDEVEQLLQNQEDSQGNVNYEE 139
            .|.:..:...||.:   |.|       .|.|.|.:...:||:
 Frog   203 RFSTVVDTPELLRS---KAG-------AQLQSDVRYTEDYEQ 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX6CLNP_001285640.1 COX6C 9..76 CDD:460756 12/42 (29%)
cox6cXP_012820048.2 COX6C 39..107 CDD:460756
Blue background indicates that the domain is not in the aligned region.

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