DRSC/TRiP Functional Genomics Resources

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Protein Alignment lz and runx3

DIOPT Version :10

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001349273.1 Gene:runx3 / 58127 ZFINID:ZDB-GENE-000605-2 Length:438 Species:Danio rerio


Alignment Length:405 Identity:144/405 - (35%)
Similarity:186/405 - (45%) Gaps:120/405 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346
            :|.||||||.:|.||||.||:|||.|||||:|||||||.:|.|||.||:.||||||..|||||.:
Zfish    68 DHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAS 132

  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPTGGP 411
            ..|||.||:||||||||||||||||||||||.|.|||||||.:|||||||||||||........|
Zfish   133 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTGPPQVATYHRAIKVTVDGPREPRRHRVKPDDP 197

  Fly   412 HYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAAAVAVTP 476
            |        :.:.|      .|.::|..:|                            |::.:.|
Zfish   198 H--------KQFSD------RLSDIERFQR----------------------------ASLRMNP 220

  Fly   477 TGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNSTINSDCQVYKPNAPHIQAAEMMGAGEWTNG-- 539
                            |.|..:...::||..::|........:.:.|.::..::.....||:.  
Zfish   221 ----------------GNGTTRPHQTHYSPSSTTQIPGLWPDQIDPPTLKTCKVEDDLRWTSTDL 269

  Fly   540 ----------SSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPPPAAAPVSVGVGGNGATMG 594
                      |..:|..:..||.|:|      :|..:           :|.|.|.|:||....  
Zfish   270 FQQRTSFPSLSPLTAPRFSDSHMHYP------SHFTY-----------SANPSSTGIGGLSVA-- 315

  Fly   595 MGMGVGVGMGMNHYGGGYDSANSLEAGQYAAHLPAVLP---EMHGHGFATD--PYQTAGYGGGNT 654
             ||..                    :.:|..:||...|   ..:.| |.|:  ||... ||   |
Zfish   316 -GMPT--------------------SSRYHTYLPPPYPGNQNQNSH-FQTNSSPYHLY-YG---T 354

  Fly   655 GGGSASKSELDYGGS 669
            |.||...|.:..|||
Zfish   355 GSGSYQFSMIPTGGS 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 281..404 CDD:459963 94/121 (78%)
runx3NP_001349273.1 Runt 62..190 CDD:459963 94/121 (78%)
RunxI 334..438 CDD:430037 15/41 (37%)

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