DRSC/TRiP Functional Genomics Resources

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Protein Alignment lz and Runx1

DIOPT Version :10

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_017453542.1 Gene:Runx1 / 50662 RGDID:2283 Length:464 Species:Rattus norvegicus


Alignment Length:437 Identity:161/437 - (36%)
Similarity:213/437 - (48%) Gaps:99/437 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346
            :||||||||.:|.||||.||.|||.|||||:|||||||.:|.|||.||:.||||||..|||||.|
  Rat    71 DHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAT 135

  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPTGGP 411
            ..|||.||:||||||||||||||||||||||.|:|||||||.:|||:|||||||||.        
  Rat   136 AAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRR-------- 192

  Fly   412 HYRALGLGQRPYIDGFPSTKALHELESLRRSA-KVA----AVTTAAAAAATAASAANAVAAA--- 468
            |.:.|....:|....|  ::.|.|||.|||:| :|:    |.|....|:...::|.|....:   
  Rat   193 HRQKLDDQTKPGSLSF--SERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQ 255

  Fly   469 -AAAVAVTPTGGG-------GGVA-----AGGVAGGAGAGLVQ---QLSSNYS-SPNSTINSDCQ 516
             |..:..:|....       |.:.     |..::.|..:|:..   :|||..| :|:.|...|.:
  Rat   256 DARQIQPSPPWSYDQSYQYLGSITSSVHPATPISPGRASGMTSLSAELSSRLSTAPDLTAFGDPR 320

  Fly   517 VYKPNAPHIQAAEMMGAGEWTNG-----------SSSSAAAYYHSHAHHPHAHHAHAHLQHQMAL 570
            .: |..|.|....|...|.:|..           |:.|:.:.||::                  |
  Rat   321 QF-PTLPSISDPRMHYPGAFTYSPPVTSGIGIGMSAMSSTSRYHTY------------------L 366

  Fly   571 PPPPPPPAAAPVSVGVGGNGATMGMGMGVGVGMGMNH--YG---GGYDSANSLEAGQYAAHLPAV 630
            |||.|              |::.........|....|  ||   |.|..  |:..|:.:.  |.:
  Rat   367 PPPYP--------------GSSQAQAGPFQTGSPSYHLYYGTSAGSYQF--SMVGGERSP--PRI 413

  Fly   631 LPEMHGHGFATDPYQTAGYGGGNTGGGSASKSE-LDYGGSYNQAWSN 676
            ||          |...|..|.........|:|: ::..||::.:.:|
  Rat   414 LP----------PCTNASTGAALLNPSLPSQSDVVETEGSHSNSPTN 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 281..404 CDD:459963 95/121 (79%)
Runx1XP_017453542.1 Runt 65..193 CDD:459963 95/129 (74%)
RunxI 374..464 CDD:430037 19/91 (21%)

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