DRSC/TRiP Functional Genomics Resources

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Protein Alignment lz and Runx3

DIOPT Version :10

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001398707.1 Gene:Runx3 / 156726 RGDID:620082 Length:423 Species:Rattus norvegicus


Alignment Length:528 Identity:159/528 - (30%)
Similarity:209/528 - (39%) Gaps:169/528 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 HPPAMVTSSSTSPTGNGWSSSTGDFKGITAVATA--TGGGVGGATQGATASTGATAAEVLAVSSS 213
            :.|..:...|||             :..|..:||  .|||.||                      
  Rat    13 YTPTFIRDPSTS-------------RRFTPPSTAFPCGGGGGG---------------------- 42

  Fly   214 ASVGSSSPTGGASNGTAHSGHSGHTGGHSSSTASNNNNNGASNSNSNNNNAVHQDLLWMERLVQK 278
             .:|.:|   ||.:..|.:|..|.|.....|..                     |:|        
  Rat    43 -KMGENS---GALSAQAAAGPGGRTRPEVRSMV---------------------DVL-------- 74

  Fly   279 RQQEHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELR 343
              .:|.||||||.:|.||||.||:|||.|||||:|||||||.:|.|||.||:.||||||..||||
  Rat    75 --ADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELR 137

  Fly   344 NFTTQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPT 408
            |.:..|||.||:||||||||||||||||||||||.|:|.|||||.:|||||||||||||.     
  Rat   138 NASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRR----- 197

  Fly   409 GGPHYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAAAVA 473
               |.:.:....:.:.|.|...:              ..||.:..:...:.|..:..::.|.   
  Rat   198 ---HRQKIEDQTKAFPDRFGDLR--------------MRVTPSTPSPRGSLSTTSHFSSQAQ--- 242

  Fly   474 VTPTGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNSTIN--SDCQVYKPNAPHIQAAEMMGAGEW 536
             ||..|                            :|.:|  ||.:.:..:.|.:|          
  Rat   243 -TPIQG----------------------------SSDLNPFSDPRQFDRSFPTLQ---------- 268

  Fly   537 TNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPPPAAAPVSVGVGGNGATMGMGMGVGV 601
                |.:.:.:.....|:|.|..|..             |.:|.|....:||....   ||....
  Rat   269 ----SLTESRFPDPRMHYPGAMSAAF-------------PYSATPSGTSLGGLSVA---GMPASS 313

  Fly   602 GMGMNHYGGGYDSANSLEAGQYAAHLPAVLPEMHGHGFATDPYQTAGYGGGNTG----------G 656
            .....:....|..|...::|.:.|: ||.....:|....:..:..|..|||...          |
  Rat   314 RFHHTYLPPPYPGAPQSQSGPFQAN-PAPYHLFYGTSSGSYQFSMAAAGGGERSPTRMLTSCPTG 377

  Fly   657 GSASKSEL 664
            .|.|...|
  Rat   378 ASVSAGNL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 281..404 CDD:459963 93/122 (76%)
Runx3NP_001398707.1 Runt 70..198 CDD:459963 95/166 (57%)
RunxI 328..423 CDD:430037 13/59 (22%)

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