DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lz and Runx3

DIOPT Version :10

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_062706.2 Gene:Runx3 / 12399 MGIID:102672 Length:423 Species:Mus musculus


Alignment Length:544 Identity:164/544 - (30%)
Similarity:212/544 - (38%) Gaps:201/544 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 HPPAMVTSSSTSPTGNGWSSSTGDFKGITAVATA--TGGGVGGATQGATASTGATAAEVLAVSSS 213
            :.|..:...|||             :..|..:||  .|||.||                      
Mouse    13 YTPTFIRDPSTS-------------RRFTPPSTAFPCGGGGGG---------------------- 42

  Fly   214 ASVGSSSPTGGASNGTAHSGHSGHTGGHSSSTASNNNNNGASNSNSNNNNAVHQDLLWMERLVQK 278
             .:|.:|   ||.:..|.:|..|.|.....|..                     |:|        
Mouse    43 -KMGENS---GALSAQATAGPGGRTRPEVRSMV---------------------DVL-------- 74

  Fly   279 RQQEHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELR 343
              .:|.||||||.:|.||||.||:|||.|||||:|||||||.:|.|||.||:.||||||..||||
Mouse    75 --ADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELR 137

  Fly   344 NFTTQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPT 408
            |.:..|||.||:||||||||||||||||||||||.|:|.|||||.:|||||||||||||.     
Mouse   138 NASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRR----- 197

  Fly   409 GGPHYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAAAVA 473
               |.:.:....:.:.|.|...:              ..||.:..:...:.|..:..::.|.   
Mouse   198 ---HRQKIEDQTKAFPDRFGDLR--------------MRVTPSTPSPRGSLSTTSHFSSQAQ--- 242

  Fly   474 VTPTGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNS------TINS-------DCQVYKPNA--- 522
             ||..|...:                  :.:|.|..      |:.|       |.:::.|.|   
Mouse   243 -TPIQGSSDL------------------NPFSDPRQFDRSFPTLQSLTESRFPDPRMHYPGAMSA 288

  Fly   523 --PHIQAAEMMGAGEWTNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPPPAAAPVSVG 585
              |:  :|...|.   :.||.|.|.....|..||.:             ||||.|   .||.|  
Mouse   289 AFPY--SATPSGT---SLGSLSVAGMPASSRFHHTY-------------LPPPYP---GAPQS-- 330

  Fly   586 VGGNGATMGMGMGVGVGMGMNHYGGGYDSANSLEAGQYAAHLPAVLPEMHGHGFATDPYQTAGYG 650
                                             ::|.:.|: ||.....:|....:..:..|..|
Mouse   331 ---------------------------------QSGPFQAN-PAPYHLFYGASSGSYQFSMAAAG 361

  Fly   651 GGN----------TGGGSASKSEL 664
            ||.          ..|.|.|...|
Mouse   362 GGERSPTRMLTSCPSGASVSAGNL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 281..404 CDD:459963 93/122 (76%)
Runx3NP_062706.2 Runt 70..198 CDD:459963 95/166 (57%)
RunxI 328..423 CDD:430037 15/94 (16%)

Return to query results.
Submit another query.