DRSC/TRiP Functional Genomics Resources

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Protein Alignment lz and runx2

DIOPT Version :10

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001128588.1 Gene:runx2 / 100189546 XenbaseID:XB-GENE-482021 Length:468 Species:Xenopus tropicalis


Alignment Length:333 Identity:126/333 - (37%)
Similarity:168/333 - (50%) Gaps:78/333 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346
            :||.|||||.:|..|||.||:|||.|||||:|||||||.||.||:.||:.||||||..||.||.:
 Frog    82 DHPAELVRTDSPNLLCSVLPSHWRCNKTLPVAFKVVALGEVSDGSVVTVMAGNDENYSAEPRNAS 146

  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPR--------S 403
            ..|||.||:||||||||||||||||||||||.|:|||||||.:|:|||||||||||        |
 Frog   147 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAMKVTVDGPREPRRHRQKLDDS 211

  Fly   404 KTS-----PTGGPHYRALGLG-----QRPYIDGFP-STKALHELESLRRS-------------AK 444
            |.|     ..|...:.::.:|     .||.::..| :.:...::...|::             :.
 Frog   212 KPSLFSERDLGRIPHPSMRMGVPPQSPRPSLNSSPFNPQGQSQIADPRQTQSSPPWSYDQSYPSY 276

  Fly   445 VAAVTTAAAAAATAASAANAVAAAAAAVAVTPTGGGGGVAAGGVAGGAGAGLVQQLS-SNYSSPN 508
            ::.:|:.:..:.|..|:..  .....|::..|....|....|..:.......:..|: |.:|:|.
 Frog   277 LSQMTSPSIHSTTPLSSTR--GTGLPAISDVPRRLSGASELGPFSDPRQFTSISSLTESRFSNPR 339

  Fly   509 ----STINSDCQVYKPNAPHIQAAEMMGAGEWTNGSS--SSAAAYYHSHAHHPHAHHAHAHLQHQ 567
                :|.     .|.|..              |.|.|  .||..:||::                
 Frog   340 MHYPATF-----TYSPPV--------------TTGMSLGMSATTHYHTY---------------- 369

  Fly   568 MALPPPPP 575
              ||||.|
 Frog   370 --LPPPYP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 281..404 CDD:459963 91/129 (71%)
runx2NP_001128588.1 Runt 76..204 CDD:459963 91/121 (75%)
PHA03247 <180..420 CDD:223021 54/235 (23%)
RunxI 378..468 CDD:430037
Blue background indicates that the domain is not in the aligned region.

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