DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and Ltbp4

DIOPT Version :10

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001163807.1 Gene:Ltbp4 / 292734 RGDID:1307033 Length:1631 Species:Rattus norvegicus


Alignment Length:1706 Identity:436/1706 - (25%)
Similarity:559/1706 - (32%) Gaps:664/1706 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 DGTQD------CFLGADELSKELKCTNDCDKDGTKC--------THGACLNGV--------CH-C 116
            ||..|      ||       :||:        |::|        |...|..|.        || |
  Rat   278 DGYSDASGFGYCF-------RELR--------GSECASPLPGLRTQEVCCRGEGLAWGVHDCHPC 327

  Fly   117 NDGYGGCN-------------------CVDKDE----NECKQRPCDVFAHCTNTLGSFTCTCFPG 158
            .:..|..|                   |||.||    ..|:.      ..|.||.|.:||.|..|
  Rat   328 AEHLGNSNRVSGPNGLCPTGFERVNGSCVDVDECATGGRCQH------GECANTRGGYTCVCPDG 386

  Fly   159 YRGNGFHCEDIDECQDPAIAARCVENAE--C--------CNLP-----AHFLCKCKD-------- 200
            :.        :|..:...|:...:..|:  |        |:||     ...:|.|..        
  Rat   387 FL--------LDSSRSSCISQHVISEAKGPCYRVLQDGGCSLPILRNITKQICCCSRVGKAWGRG 443

  Fly   201 -------GYEGDGEVL---------CTDVDECRNPENCGPNALCTNTP--GNYTCSCPDGYV--- 244
                   |.||..|:.         .:|:.....|.|..|..:..|.|  ...|...|.|::   
  Rat   444 CQLCPPYGSEGFREICPAGPGYHYSASDLRYNTRPLNPDPPRVTFNQPRAPPVTLRPPTGFLPTR 508

  Fly   245 --------GNNP--------------------------YREGCQDVDECS-YPNVCGPGAICTNL 274
                    |..|                          ..|.......|. .|.|||||. |.:.
  Rat   509 RPEPRPDPGPQPELRPRPEPQPRPEFPLPSIPAWTGPEIPESGTSSSMCQRNPQVCGPGR-CVSR 572

  Fly   275 EGSYRCDCPPGYDGDGRSESGCVDQDECAR--TPC--GRNADCLNTDGSFRCLCPDGYSGDP-MN 334
            .|.|.|.|.||: ..|...:.|:|.|||.|  |||  ||   |.||.|||||:|..|:...| ..
  Rat   573 PGGYTCACDPGF-RLGPQGTRCIDVDECRRVPTPCAPGR---CENTPGSFRCVCGTGFRAGPRAT 633

  Fly   335 GCEDVDEC-ATNNPCGLGAECVNLGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDI 398
            .|.||||| ....||..| .|.|..|||.|.||:|:  :..||                      
  Rat   634 ECLDVDECRRVPPPCDRG-RCENTPGSFLCVCPAGY--QAAPH---------------------- 673

  Fly   399 APYQRTSGAGLACLDIDECNQPDGVAKCGTNAKCINFPGSYRCLCPSGFQGQGYLHC-ENINEC- 461
                     |.:|.|:|||.|..|:  ||..| |.|.|||:||:||:||.|..   | |:::|| 
  Rat   674 ---------GASCQDVDECTQSPGL--CGRGA-CENLPGSFRCVCPAGFLGSA---CEEDVDECA 723

  Fly   462 -QDNPCGENAICTDTVGSFVCTCKPDY-TGDPFRGCVDIDECTALDKPCGQHAVCENTVPGYNCK 524
             |..|||... |.:|:|||.|.|...: :..|...|.|:|||.....||. :..||||...:.|.
  Rat   724 QQPPPCGPGR-CDNTLGSFHCACPAGFRSRGPGAPCQDVDECARSPSPCA-YGRCENTEGSFKCV 786

  Fly   525 CPQGYDGKPDPKVA---CEQVDVNILCSSNFDCTNNAECIEN----QC-FCLDGFEPIGSSCVDI 581
            ||.|:    .|..|   ||.||.   |.::..|... ||:.:    || .|..|:......|.|:
  Rat   787 CPTGF----QPNAAGSECEDVDE---CENHLACPGQ-ECVNSPGSFQCRACPVGYHLHRGRCTDV 843

  Fly   582 DECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMACKQPCEDVR-------CGAHAYCKPD 639
            |||.: ...||.|.||.|..||:.|.|..||.....|..   ||.|:.       |..|..|...
  Rat   844 DECNS-GTPCGLHGQCTNAQGSFHCSCSTGYRAPSGRPG---PCADINECLEGDFCFPHGECLNT 904

  Fly   640 QNEAYCVCEDGWTYNPSDVAAGCVDIDEC---DVMHGPFGSCGQNATCTNSAGGFTCACPPGFSG 701
            .....|.|..|  |.|....|.|:|:|||   |:       | |:..|||:.|.|.|.||||...
  Rat   905 DGSFTCTCAPG--YRPGPRGASCLDVDECSEEDL-------C-QSGICTNTDGSFECICPPGHRA 959

  Fly   702 DPH-SKCVDVDECR-TGASKCGAGAECVNVPGGGYTCRCPGNTIADPDPSVRCVPIVSCSANEDC 764
            .|. :.|:|:|||| .|.:.||: ..|.|.| |.|.|      :.|.||.....|..:|...::|
  Rat   960 GPDLASCLDIDECRERGPALCGS-QRCENSP-GSYRC------VRDCDPGYHPGPEGTCDDVDEC 1016

  Fly   765 P--GNSICDATKRCLCPEPNIGNDCRHPCEALNCGAHAQCMLANGQAQCLCAPGYTGNSALAGGC 827
            .  |::||.|.:                ||  |.....:|..|       |.|||  .....|||
  Rat  1017 REYGSAICGAQR----------------CE--NTPGSYRCTPA-------CDPGY--QPTPGGGC 1054

  Fly   828 NDIDECRANP-CAEKAICSNTAGGYLCQCPGGSSGDPYREGCITSKTVGCSDANPCATGETCVQD 891
            .|:||||... |...|:|.|..|.:                                        
  Rat  1055 QDVDECRNRSFCGAHAMCQNLPGSF---------------------------------------- 1079

  Fly   892 SYTGNSVCICRQGYERNSENGQCQDVDECSVQRGKPACGLNALCKNLPGSYECRCP--------- 947
                  .|:|.||||...:...|.||:||...:|  .|| :|||:|:.||:.|.||         
  Rat  1080 ------QCVCDQGYEGARDGRHCVDVNECETLQG--VCG-SALCENVEGSFLCVCPTSPEEFDPM 1135

  Fly   948 --------------------------------------------QGHNGNPFIMC-------EIC 961
                                                        ||...:....|       :.|
  Rat  1136 TGRCVPPRTPAGTFPGSQPQAPASPSLPARPPAPPPPRRPSPPRQGPVSSGRRECYFDTAAPDAC 1200

  Fly   962 NT--------PECQCQSPYKLVGNSCVLSGCSSG---QACPSGAECISIAGGVSYCACPKGYQTQ 1015
            :.        .||.|     .||     .|..||   |.|| |.|   .|...|.|...:||.. 
  Rat  1201 DNILARNVTWQECCC-----TVG-----EGWGSGCRIQQCP-GTE---TAEYQSLCPHGRGYLV- 1250

  Fly  1016 PDGSCV---DVDECEERGAQLCAFGAQCVNKPGSYSCHCPEGYQGDAYNGLCALAQRKCAADREC 1077
            |.|...   |||||:....|:|..|. |||....|||:|..|:...|:.                
  Rat  1251 PSGDLSARRDVDECQLFQDQVCKSGV-CVNTAPGYSCYCNNGFYYHAHR---------------- 1298

  Fly  1078 AANEKCIQPGECVCPPPYFLDPQDNNKCKSPCERFPCGINAKCTPSDPPQCMCEAGFKGDPLLGC 1142
                                                                          |.|
  Rat  1299 --------------------------------------------------------------LEC 1301

  Fly  1143 TDEDECS-HLPCAYGAYCVNKKGGYQCVCPKDYTGDPYKSGCIFESGTPKSKCLSNDDCASNLAC 1206
            .|.|||: ..|...|..|||..|.|.|.|......|..:..|:      .::..|.||   ||  
  Rat  1302 VDNDECADEEPACEGGRCVNTVGSYHCTCEPPLVLDGSRRRCV------SNESQSLDD---NL-- 1355

  Fly  1207 LEGSC---VSPCSSLLCGSNAYCETEQHAGWCRCRVGYVKNGDGDC-VSQCQDVICGDG--ALC- 1264
              |.|   |.|  .|:|...   ..::.|.:..|...|.:....|| :...||   .|.  ||| 
  Rat  1356 --GVCWQEVGP--DLVCSRP---RLDRQATYTECCCLYGEAWGMDCALCPAQD---SDDFEALCN 1410

  Fly  1265 --IPTSEGPTCKCPQGQLGNPFPGGSCSTDQCSAARPCGERQICINGRCKERCEGVVCGIGATCD 1327
              .|.:.||           |.||                                  |.|...:
  Rat  1411 VLRPPAYGP-----------PRPG----------------------------------GFGLPYE 1430

  Fly  1328 RNNGKCICEP--NFVGNPDLICMP--PIEQAKCSPGCGENAHCEYG---------------LGQS 1373
              .|..|..|  :....|||...|  |.:.....||........||               .|::
  Rat  1431 --YGPDIGPPYQSLPYGPDLYPPPVLPYDPYPPPPGPFARREAPYGAPPFEMPDFEDDGDPYGET 1493

  Fly  1374 RCACNP------------------------------GTFGNPYEGCGAQSKNVCQPNSCGPNAEC 1408
            .....|                              |....||||..|:        .||....|
  Rat  1494 EAPDPPSRGTGWPYRSRDTRGSFPEPEESSERGSYTGALSEPYEGLEAE--------ECGILDGC 1550

  Fly  1409 RAVGNHISCL-CPQGFSGNPYIG---------CQDVDEC----ANKPCGLNAACLNRAGGFECLC 1459
            .    |..|: .|:||:.:.:.|         |.|::||    |..|..:||.|:|..|.|.|:|
  Rat  1551 A----HGRCVRVPEGFTCDCFDGYRLDITRMSCVDINECDEAEATSPLCVNARCVNTDGSFRCIC 1611

  Fly  1460 LSGHA--GNPYSSCQP 1473
            ..|.|  ..|: .|.|
  Rat  1612 RPGFAPTHQPH-HCAP 1626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:463759 8/28 (29%)
EGF_CA 212..247 CDD:238011 10/47 (21%)
EGF_CA 255..>286 CDD:214542 13/31 (42%)
EGF_CA 298..331 CDD:238011 20/36 (56%)
EGF_CA 338..373 CDD:238011 17/35 (49%)
EGF_CA 413..456 CDD:238011 22/43 (51%)
EGF_CA 457..490 CDD:238011 13/35 (37%)
EGF_CA 497..>529 CDD:214542 13/31 (42%)
EGF_CA 580..>612 CDD:214542 14/31 (45%)
EGF_3 676..702 CDD:463759 12/25 (48%)
EGF_CA 1022..1056 CDD:214542 16/33 (48%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
Herpes_BLLF1 <4032..4489 CDD:282904
Herpes_BLLF1 <4334..4797 CDD:282904
PHA03255 4845..>5021 CDD:165513
DUF5585 4959..5356 CDD:465521
PHA03247 <5170..5799 CDD:223021
PRK12495 <5749..5877 CDD:183558
PHA03247 <5865..6485 CDD:223021
Chi1 6385..>6609 CDD:442692
Herpes_BLLF1 <6607..7102 CDD:282904
Herpes_BLLF1 <7027..7490 CDD:282904
DUF5585 7550..7954 CDD:465521
DUF5585 7881..>8130 CDD:465521
Atrophin-1 18652..>19081 CDD:460830
PHA03247 <18873..19514 CDD:223021
ZP 22576..22811 CDD:214579
Ltbp4NP_001163807.1 EGF_CA 357..>387 CDD:214542 11/35 (31%)
TB 418..459 CDD:459903 9/40 (23%)
EGF_CA 595..631 CDD:214542 20/38 (53%)
EGF_CA 637..678 CDD:214542 20/74 (27%)
EGF_CA 679..716 CDD:238011 21/42 (50%)
EGF_CA 718..752 CDD:214542 13/34 (38%)
EGF_CA 760..801 CDD:214542 16/45 (36%)
EGF_CA 802..837 CDD:214542 10/38 (26%)
EGF_CA 842..874 CDD:238011 15/32 (47%)
EGF_CA 885..921 CDD:214542 9/37 (24%)
EGF_CA 927..962 CDD:214542 17/42 (40%)
EGF_CA 968..1006 CDD:214542 17/45 (38%)
EGF_CA 1056..1097 CDD:214542 16/86 (19%)
EGF_CA 1098..1126 CDD:473889 14/30 (47%)
TB 1200..1242 CDD:459903 16/55 (29%)
EGF_CA 1303..>1332 CDD:238011 13/28 (46%)
TB 1367..1409 CDD:459903 10/47 (21%)
EGF_CA 1581..>1615 CDD:214542 13/33 (39%)
Blue background indicates that the domain is not in the aligned region.

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