DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr8a and Gr98c

DIOPT Version :10

Sequence 1:NP_511097.3 Gene:Gr8a / 31865 FlyBaseID:FBgn0030108 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster


Alignment Length:450 Identity:90/450 - (20%)
Similarity:148/450 - (32%) Gaps:136/450 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGHLGRVLQFHLRLYQVLGFHGLPLPGD--GNPARTRRR---LMAWSLFL-------------- 46
            |.....|:|.......|||...||..|.:  ....|.|||   :..:||:|              
  Fly     3 MEAKRSRLLTTARPYLQVLSLFGLTPPAEFFTRTLRKRRRFCWMAGYSLYLIAILLMVFYEFHAN 67

  Fly    47 LISLSALVLACLFSGEEF---LYRGDMF------GC--ANDALKY-----VFAELGVLAIYLETL 95
            ::||...:..  |..|:|   :.|...|      .|  .|..|.|     ::.|:..|.:.::..
  Fly    68 IVSLHLEIYK--FHVEDFSKVMGRTQKFLIVAIATCNQLNILLNYGRLGLIYDEIANLDLGIDKS 130

  Fly    96 SSQRHLANFWWLHFKLGGQKTGLVSLRSEFQQFCRYLIFLYAMMAAEVAIHLGL--------WQF 152
            |......:.||                 .|:......|.|:.::...|...|.|        |..
  Fly   131 SKNFCGKSHWW-----------------SFRLRLTLSIGLWMVIIIGVIPRLTLGRAGPFFHWVN 178

  Fly   153 QALTQHMLLFWSTYEPLVWLTYLRNLQFVLH----LELLREQL-------------TGLEREMGL 200
            |.|||.:|:......|...|..|...:.:|.    ||.|::.|             ..|::...|
  Fly   179 QVLTQIILIMLQLKGPEYCLFVLLVYELILRTRHVLEQLKDDLEDFDCGARIQELCVTLKQNQLL 243

  Fly   201 LAEYSRFASETGRSFPGFESFLRRRLVQKQRIYSHVYDMLKCFQGAFNFSILAVLLTINIRIAVD 265
            :....|...|.|..|....:.|                        |.::.|.:|..:|      
  Fly   244 IGRIWRLVDEIGAYFRWSMTLL------------------------FLYNGLTILHVVN------ 278

  Fly   266 CYFMYYSIYNNVINND----------YYLIVPALLEIPAFIYASQSCMVVVPRIAHQLHNIVTDS 320
                 ::|..::..||          .:|....||.    .:.|:.|:.....|::.||.|    
  Fly   279 -----WAIIRSIDPNDCCQLNRLGSITFLSFNLLLT----CFFSECCVKTYNSISYILHQI---- 330

  Fly   321 GCCSCPD----LSLQIQNFSLQLLHQPIRIDCLGLTILDCSLLTRMACSVGTYMIYSIQF 376
            ||....:    |.:.::.:.||:.|..:...|.||..::..|...|..::..|:|..:||
  Fly   331 GCLPTAEEFQMLKMGLKEYILQMQHLKLLFTCGGLFDINIKLFGGMLVTLCGYVIIIVQF 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr8aNP_511097.3 7tm_7 9..376 CDD:462463 86/440 (20%)
Gr98cNP_524531.2 7tm_7 15..393 CDD:462463 86/437 (20%)

Return to query results.
Submit another query.