DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and Fgfr1

DIOPT Version :10

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_077060.2 Gene:Fgfr1 / 79114 RGDID:620713 Length:822 Species:Rattus norvegicus


Alignment Length:442 Identity:94/442 - (21%)
Similarity:185/442 - (41%) Gaps:107/442 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 ALAVTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNT----HEMTLQTPIIERE---------- 454
            |..::|:: ||.::          ||...|.:.:..::    |::....| :.|:          
  Rat   384 AFLISCMV-GSVII----------YKMKSGTKKSDFHSQMAVHKLAKSIP-LRRQVTVSADSSAS 436

  Fly   455 -NNGYL-----------------VEDDPLPHSPENFKQQLQQLVEGYERIPRNALRLNVNDVIGD 501
             |:|.|                 |.:..||..|.            :| :||:  ||.:...:|:
  Rat   437 MNSGVLLVRPSRLSSSGTPMLAGVSEYELPEDPR------------WE-LPRD--RLVLGKPLGE 486

  Fly   502 GRFGEIITG--------------KVSTNDFARDCTLHVLCLDDLNGTTQAQLLRELRQLSQLKRQ 552
            |.||:::..              ||:......|.|...|          :.|:.|:..:..:.:.
  Rat   487 GCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL----------SDLISEMEMMKMIGKH 541

  Fly   553 EHLLDFYGVSASPDWFYLIFEQQRMSLKRKLVESR-------LMAPS--PRLTSLSEQLVLQWIY 608
            :::::..|........|:|.|.......|:.:::|       ...||  |. ..||.:.::...|
  Rat   542 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVSCAY 605

  Fly   609 ELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFG---PLPYMNIARQQPDHN---RWLAPE 667
            ::|..|.||:|.:.:||.|.:.:|.||.|..:|::.||   .:.:::..::..:..   :|:|||
  Rat   606 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 670

  Fly   668 VLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRPAQPAYVYGDLYQL 732
            .| ....::.:|||||...:.||...|||:||.....  ::|.:.::...|..:|:....:||.:
  Rat   671 AL-FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLKEGHRMDKPSNCTNELYMM 732

  Fly   733 LLNCWQLEPSERSSCEDVAFGVRQL--MTSPRHALSFDRVAGGLDTLPPYLP 782
            :.:||...||:|.:.:.:...:.::  :||.:..|.   ::..||...|..|
  Rat   733 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLD---LSMPLDQYSPSFP 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:460348
fn3 130..222 CDD:394996
PTKc 497..750 CDD:270623 65/281 (23%)
Fgfr1NP_077060.2 IgI_1_FGFR 25..118 CDD:409362
Ig strand A 25..28 CDD:409362
Ig strand A' 40..46 CDD:409362
Ig strand B 49..59 CDD:409362
Ig strand C 63..68 CDD:409362
Ig strand C' 71..73 CDD:409362
Ig strand D 78..82 CDD:409362
Ig strand E 85..90 CDD:409362
Ig strand F 96..105 CDD:409362
Ig strand G 108..118 CDD:409362
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..162
IgI_2_FGFR 153..247 CDD:409443
Ig strand A 153..156 CDD:409443
Heparin-binding 160..177
Ig strand A' 164..169 CDD:409443
Ig strand B 173..181 CDD:409443
Ig strand C 187..192 CDD:409443
Ig strand C' 195..197 CDD:409443
Ig strand D 206..209 CDD:409443
Ig strand E 213..218 CDD:409443
Ig strand F 227..234 CDD:409443
Ig strand G 237..247 CDD:409443
Ig 255..359 CDD:472250
Ig strand B 273..277 CDD:409444
Ig strand C 286..290 CDD:409444
Ig strand E 324..328 CDD:409444
Ig strand F 338..343 CDD:409444
Ig strand G 351..354 CDD:409444
PTKc_FGFR1 464..765 CDD:270678 75/329 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..822 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.