DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and styk1b

DIOPT Version :10

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_001292494.2 Gene:styk1b / 324714 ZFINID:ZDB-GENE-030131-3435 Length:447 Species:Danio rerio


Alignment Length:414 Identity:86/414 - (20%)
Similarity:146/414 - (35%) Gaps:90/414 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 VIFGSCLLLSLIAYFYLRY-------------KTCRGRRLTGG------------------NTHE 443
            |||....|::|:....||:             :..|.||...|                  .|..
Zfish    33 VIFFMMFLITLLFIMLLRFCPEKVERLQPASSRVSRTRRNLQGIDAPLGLNALEGEPIALDTTTY 97

  Fly   444 MTLQTPI---IERENNGYLVE--------------DDPLPHSPENFKQQLQQLVEGYERIPRNAL 491
            ||....:   ::.:||....:              :.|....||||        .|...:|. :.
Zfish    98 MTFNPTMPARLDHDNNVAFTDGMFGATASAFAKPRELPRQRLPENF--------NGVAPLPA-SY 153

  Fly   492 RLNVNDVIGDGRFGEIITGKVSTNDFARDCTLHVLCLDDLNGTTQAQLLRELRQLSQLKRQEHLL 556
            .|..:..|      .:...::..    |:..|.|| .|..:.......|.....||||.....|.
Zfish   154 SLKSDSPI------SLYRARMEN----RNVVLRVL-KDSASNQESQSFLGFAAFLSQLGPHPFLP 207

  Fly   557 DFYGV-SASPDWFYLIFEQQRMSLKRKLVESRLMAPSP-RLTSLSEQLVLQWIYELASAMNYLSS 619
            :..|| |.......:|.|.:...|...|...|.....| .:..::|:.:......:|||:::|..
Zfish   208 ELLGVISLRAPLITVIEEMENRDLLGFLWRCRQDNVGPDGMCQMTEKKIFNMASHVASALDFLHG 272

  Fly   620 CQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIA-----RQQPDHNRWLAPEVLRHQHHHSTRS 679
            ..:.|..|.:.:|.|:.....||.....| |...:     .:.|...:|.|||:|. :...:.:|
Zfish   273 KDLHHCNLKARNVLVSRICTAKLWGLDDL-YTRTSGSGNYSEDPGRKKWQAPELLA-KRPSTPKS 335

  Fly   680 DVWSLACVAWECCALGGTPYANA----VASNQQLLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLE 740
            |:||...:.:|...||..|:|..    :..:.|.::.||      :|......||.::.:|...:
Zfish   336 DIWSFGLLLYEMVTLGEVPFAEIPVKDLLQHHQRVKPIR------KPNNCSNSLYSIIKSCCHWK 394

  Fly   741 PSERSSCEDVAFGVRQLMTSPRHA 764
            ..:|.|..:|.   |:|.:..:.|
Zfish   395 EQDRPSLAEVR---RKLQSGEKSA 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:460348
fn3 130..222 CDD:394996
PTKc 497..750 CDD:270623 58/263 (22%)
styk1bNP_001292494.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.