DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and Fgfr2

DIOPT Version :10

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_036844.1 Gene:Fgfr2 / 25022 RGDID:2611 Length:841 Species:Rattus norvegicus


Alignment Length:478 Identity:99/478 - (20%)
Similarity:195/478 - (40%) Gaps:107/478 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 DQHVTSLDDFSYATFEKGQSSVVALAVTC--VIFGSCLLLSLIAYFYLRYKTCRGRRLTGGN--T 441
            ::.:|:..|:            :.:|:.|  |...:|:::::|   :.|.||...:......  .
  Rat   386 EKEITASPDY------------LEIAIYCIGVFLIACMVVTVI---FCRMKTTTKKPDFSSQPAV 435

  Fly   442 HEMTLQTPI-----IERENNGYLVEDDPLPHSPENFKQ----QLQQLVEGYE-------RIPRNA 490
            |::|.:.|:     :..|::..:..:.||.........    .:...|..||       ..||: 
  Rat   436 HKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVSEYELPEDPKWEFPRD- 499

  Fly   491 LRLNVNDVIGDGRFGEIITGKVSTNDFARD---CTLHVLCL-DDLNGTTQAQLLRELRQLSQLKR 551
             :|.:...:|:|.||:::..:....|..|.   .|:.|..| ||......:.|:.|:..:..:.:
  Rat   500 -KLTLGKPLGEGCFGQVVMAEAVGIDKDRPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 563

  Fly   552 QEHLLDFYGVSASPDWFYLIFEQQRMSLKRKLVESRL-----------MAPSPRLTSLSEQLVLQ 605
            .:::::..|........|:|.|.......|:.:.:|.           ..|..::|...   ::.
  Rat   564 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD---LVS 625

  Fly   606 WIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIARQQPDHN--------- 661
            ..|:||..|.||:|.:.:||.|.:.:|.||.:..:|::.||      :||   |.|         
  Rat   626 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG------LAR---DINNIDYYKKTT 681

  Fly   662 ------RWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRPA 720
                  :|:|||.| ....::.:|||||...:.||...|||:||.....  ::|.:.::...|..
  Rat   682 NGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLKEGHRMD 743

  Fly   721 QPAYVYGDLYQLLLNCWQLEPSERSSCEDVAFGVRQLMT-----------------SPRHALSFD 768
            :|.....:||.::.:||...||:|.:.:.:...:.:::|                 ||.:..:..
  Rat   744 KPTNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLTQPLEQYSPSYPDTRS 808

  Fly   769 RVAGGLDTL--------PPYLPQ 783
            ..:.|.|::        .|.|||
  Rat   809 SCSSGDDSVFSPDPMPYDPCLPQ 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:460348
fn3 130..222 CDD:394996
PTKc 497..750 CDD:270623 68/282 (24%)
Fgfr2NP_036844.1 Ig 50..143 CDD:472250
Ig strand B 77..81 CDD:409362
Ig strand C 88..92 CDD:409362
Ig strand E 109..113 CDD:409362
Ig strand F 123..128 CDD:409362
Ig strand G 136..139 CDD:409362
IgI_2_FGFR 173..267 CDD:409443
Ig strand A 173..176 CDD:409443
Ig strand A' 184..189 CDD:409443
Ig strand B 193..201 CDD:409443
Ig strand C 207..212 CDD:409443
Ig strand C' 215..217 CDD:409443
Ig strand D 226..229 CDD:409443
Ig strand E 233..238 CDD:409443
Ig strand F 247..254 CDD:409443
Ig strand G 257..267 CDD:409443
Ig 275..377 CDD:472250
Ig strand B 293..297 CDD:409353
Ig strand C 306..310 CDD:409353
Ig strand E 342..346 CDD:409353
Ig strand F 356..361 CDD:409353
Ig strand G 369..372 CDD:409353
PTKc_FGFR2 476..788 CDD:270679 75/328 (23%)
Blue background indicates that the domain is not in the aligned region.

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