DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wsck and F40G9.8

DIOPT Version :10

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_001367839.1 Gene:F40G9.8 / 185556 WormBaseID:WBGene00018244 Length:273 Species:Caenorhabditis elegans


Alignment Length:167 Identity:33/167 - (19%)
Similarity:59/167 - (35%) Gaps:57/167 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 CGQASIEATTE-------VGLPSPVPAQPKILSRTDRT-----VTIELSPIRNDNGPLSKLLVIV 286
            |....::||.|       ||.||        .|..|:.     ..:::|.......|.:.:|   
 Worm     8 CFVLKLKATKETPGTRIIVGPPS--------FSIFDQEFYTPGTRLQISCSSTSTSPEALIL--- 61

  Fly   287 EYVDNALSQPFDAQLLGSWQQAQ----QDGVPYYIAAELDYDRPEDNRTRRFVVGDGKRYGRFTN 347
                ..:|:.|.:.:..::.:..    :.||.|.|:.:      ||...|.:.||          
 Worm    62 ----ETISRKFGSLVAANYNKVVDGTFESGVFYNISLK------EDLEVRCWKVG---------- 106

  Fly   348 KPLDQPDAHVHISLGLVSTLEGVTKTMY--SRGTHDQ 382
            |.:.        |:.|::..:|..||.|  .:.:|.|
 Worm   107 KKIP--------SIKLINVADGPAKTFYEFEKSSHLQ 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:460348
fn3 130..222 CDD:394996
PTKc 497..750 CDD:270623
F40G9.8NP_001367839.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.