DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wsck and Flt4

DIOPT Version :10

Sequence 1:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_032055.1 Gene:Flt4 / 14257 MGIID:95561 Length:1363 Species:Mus musculus


Alignment Length:800 Identity:159/800 - (19%)
Similarity:270/800 - (33%) Gaps:289/800 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 VLASEKCFCANVLEPQEQQDEQLCNTRCLANKAQYCGGVGVHSYYSTILTKQPGPHHLRI-SNKT 141
            |.|..||...|    :..|||:|                 ::.|.:||      |....| |..:
Mouse   528 VSAMYKCVVVN----KVGQDERL-----------------IYFYVTTI------PDGFSIESEPS 565

  Fly   142 ENSLTLSWNAYEARKLLLAGGAEAVLPNQLLDNFLIKAQVLKTYSSLPAFPQPEFMVQSTETQFE 206
            |:.|       |.:.:.|:..|         ||:        ||..|..:            :..
Mouse   566 EDPL-------EGQSVRLSCRA---------DNY--------TYEHLRWY------------RLN 594

  Fly   207 LTDLHPA-------TLYNISVRAMCKDAQVGQSECGQASIEATTEVGLPSPVP------------ 252
            |:.||.|       ...|:.:.|...:|.:.::|.|  :..||..:.:|...|            
Mouse   595 LSTLHDAQGNPLLLDCKNVHLFATPLEANLEEAEPG--ARHATLSLNIPRVAPEDEGDYVCEVQD 657

  Fly   253 --AQPKILSRTDRTVTIELSPIRNDNGPLSKLLV-------------------IVEYVDNALSQP 296
              :|.|...:...:|....:|....|  |:.|||                   ||.|.|..|.: 
Mouse   658 RRSQDKHCHKKYLSVQALEAPRLTQN--LTDLLVNVSDSLEMRCPVAGAHVPSIVWYKDERLLE- 719

  Fly   297 FDAQLLGSWQQAQQDGVPYYIAAELDYDRPEDNR---TRRFVVGDGKRYGRFTNKPLDQPDAHVH 358
                        ::.|:          |..:.|:   .:|....|..||                
Mouse   720 ------------KESGI----------DLADSNQRLSIQRVREEDAGRY---------------- 746

  Fly   359 ISLGLVSTLEGVTKTMYS---RGTHDQHVTSLDDFSYATFEKGQSSVVALAVTCVIFGSCLLLSL 420
              |..|...:|...:..|   .|:.|               ||...:|.|..|.||.....:|.|
Mouse   747 --LCSVCNAKGCVNSSASVAVEGSED---------------KGSMEIVILIGTGVIAVFFWVLLL 794

  Fly   421 IAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIERENNGYL-VEDDP--LPHSPENFKQQLQQLVEG 482
            :.:       |..:|             |.......||| :..||  :|     .::|.:.|  .
Mouse   795 LIF-------CNMKR-------------PAHADIKTGYLSIIMDPGEVP-----LEEQCEYL--S 832

  Fly   483 YE----RIPRNALRLNVNDVIGDGRFGEIITGKVSTNDFARDC-TLHVLCLDDLNGTTQAQ---L 539
            |:    ..||.  ||::..|:|.|.||:::.......:....| |:.|..|.:  |.|.::   |
Mouse   833 YDASQWEFPRE--RLHLGRVLGHGAFGKVVEASAFGINKGSSCDTVAVKMLKE--GATASEHRAL 893

  Fly   540 LRELRQLSQLKRQEHLLDFYGVSASPDWFYLIF----------------------------EQQR 576
            :.||:.|..:....::::..|....|:...::.                            ||:|
Mouse   894 MSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRVKRDTFNPYAEKSPEQRR 958

  Fly   577 M----------------SLKRKLVESRLMAP-SPRLTSLSEQLVLQWI------------YELAS 612
            .                |..|.|....||.. |.|...|.::....|:            :::|.
Mouse   959 RFRAMVEGAKADRRRPGSSDRALFTRFLMGKGSARRAPLVQEAEDLWLSPLTMEDLVCYSFQVAR 1023

  Fly   613 AMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIAR---QQPDHNR---------WLA 665
            .|.:|:|.:.:||.|.:.::.::....:|:..||      :||   :.||:.|         |:|
Mouse  1024 GMEFLASRKCIHRDLAARNILLSESDIVKICDFG------LARDIYKDPDYVRKGSARLPLKWMA 1082

  Fly   666 PEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRPAQPAYVYGDLY 730
            ||.: ....::|:|||||...:.||..:||.:||. .|..|::..:.::...|...|......:.
Mouse  1083 PESI-FDKVYTTQSDVWSFGVLLWEIFSLGASPYP-GVQINEEFCQRLKDGTRMRAPELATPAIR 1145

  Fly   731 QLLLNCWQLEPSERSSCEDV 750
            .::.:||..:|..|.:..|:
Mouse  1146 HIMQSCWSGDPKARPAFSDL 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WsckNP_733018.1 WSC 42..115 CDD:460348 9/36 (25%)
fn3 130..222 CDD:394996 18/99 (18%)
PTKc 497..750 CDD:270623 68/325 (21%)
Flt4NP_032055.1 IgI_VEGFR 230..329 CDD:409448
Ig strand A 230..234 CDD:409448
Ig strand A' 240..244 CDD:409448
Ig strand B 246..255 CDD:409448
Ig strand C 262..267 CDD:409448
Ig strand C' 270..272 CDD:409448
Ig strand D 276..284 CDD:409448
Ig strand E 289..297 CDD:409448
Ig strand F 307..313 CDD:409448
Ig strand G 318..324 CDD:409448
Ig 331..418 CDD:472250
Ig strand B 352..356 CDD:409449
Ig strand C 365..369 CDD:409449
Ig strand E 382..386 CDD:409449
Ig strand F 396..401 CDD:409449
Ig strand G 411..414 CDD:409449
IG_like 570..663 CDD:214653 22/123 (18%)
Ig strand B 574..578 CDD:409353 1/3 (33%)
Ig strand C 587..591 CDD:409353 1/3 (33%)
Ig strand E 636..640 CDD:409353 0/3 (0%)
Ig strand F 650..655 CDD:409353 0/4 (0%)
Ig 678..765 CDD:472250 22/129 (17%)
Ig strand B 695..699 CDD:409353 0/3 (0%)
Ig strand C 708..712 CDD:409353 2/3 (67%)
Ig strand E 731..735 CDD:409353 0/3 (0%)
Ig strand F 745..750 CDD:409353 3/22 (14%)
VEGFR-2_TMD 770..804 CDD:375470 12/68 (18%)
Protein Kinases, catalytic domain 837..1175 CDD:473864 73/340 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1288..1330
Blue background indicates that the domain is not in the aligned region.

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