DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(r) and Dhod

DIOPT Version :10

Sequence 1:NP_727320.1 Gene:su(r) / 31858 FlyBaseID:FBgn0086450 Length:1031 Species:Drosophila melanogaster
Sequence 2:NP_477224.1 Gene:Dhod / 41022 FlyBaseID:FBgn0000447 Length:405 Species:Drosophila melanogaster


Alignment Length:337 Identity:83/337 - (24%)
Similarity:144/337 - (42%) Gaps:62/337 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 DAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVT------NVS 582
            |..::.....|....||.|:|:.....:.| :....:.|:||:...|       ||      |..
  Fly    82 DDQNLHTSFFGRMLSNPIGIAAGFDKNAEA-VDGLQDLGFGFIEVGT-------VTPAAQEGNPK 138

  Fly   583 PRIVRGTTS-------GYKYGPQQGCFLNIELISEKRAEYWLKSIG-ELKRDFPEKIVIASIMCS 639
            ||:.|.|..       |:.....|.....:.|:.:|  |.:...:| .|.|:   |..::.|   
  Fly   139 PRVFRLTEDKAIINRYGFNSDGHQAVLQRLRLLRKK--ENFNGVVGVNLGRN---KTTMSPI--- 195

  Fly   640 FNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQDP----ELVEQIS---RWVRKAV 697
               .|:.: .::.....||.|.:|:|.|:..|.|.|     |..    ||:||::   ..:.|..
  Fly   196 ---ADYVQ-GVRVFGPVADYLVINVSSPNTKGLRDM-----QSKEKLRELLEQVNDTKSSLDKNK 251

  Fly   698 KLPFFIKLTPNIT-----DIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIGKEQRTTY 757
            .:|..:||:|:::     |||.: ...|:...||....||......::.:..|       :.|  
  Fly   252 NVPILLKLSPDLSLDDMKDIVWV-IKRKKSRVDGLIVSNTTVSRENIEKNKLA-------EET-- 306

  Fly   758 GGVSGNATRPMALKAISDIANRVPG-FPILGIGGIDSGEVALQFIHAGATVLQICSSVQNQDFTV 821
            ||:||...:..:.:.|:.:.....| .||:|:||:.||..|.:.|.|||:.:||.:::..:...:
  Fly   307 GGLSGPPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYTALVYEGPAL 371

  Fly   822 IEDYCTALKALL 833
            :||....|.||:
  Fly   372 VEDIKAELSALI 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(r)NP_727320.1 PRK11749 55..507 CDD:481254
DHPD_FMN 527..829 CDD:239244 79/328 (24%)
NapF <887..1009 CDD:440760
Fer4_21 946..1004 CDD:434137
DhodNP_477224.1 DHOD_2_like 51..379 CDD:240089 80/331 (24%)
Blue background indicates that the domain is not in the aligned region.

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