Protein Alignment spn-D and DMC1

DIOPT Version :10

• Sequence 1: NP_733200.1
• Gene: spn-D / 318579
• FlyBaseID: FBgn0003482
• Length: 270
• Species: Drosophila melanogaster
• Sequence 2: NP_011106.1
• Gene: DMC1 / 856926
• SGDID: S000000981
• Length: 334
• Species: Saccharomyces cerevisiae
• Alignment Length: 185
• Identity: 57/185 - (30%)
• Similarity: 81/185 - (43%)
• Gaps: 15/185 - (8%)

  Fly    37 DISQSASNKILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSA 101
            ||.|...: :.||.|.||:..||||....:.|:.|....|||||...||:..|:|:..||.||..
Yeast    88 DIRQRVYS-LSTGSKQLDSILGGGIMTMSITEVFGEFRCGKTQMSHTLCVTTQLPREMGGGEGKV 151

  Fly   102 LFIDTRQDFHPDRLMGLALKLERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHRHLVD 166
            .:|||...|.|:|:..:|...|..     ||    ..|..:.|.|....:..|..|......| .
Yeast   152 AYIDTEGTFRPERIKQIAEGYELD-----PE----SCLANVSYARALNSEHQMELVEQLGEEL-S 206

  Fly   167 HPDIKLIVIDSLAFTLRMLEDG----AHRYEMLLELHESMRRLQRQHELTWVFTN 217
            ..|.:|||:||:....|:...|    :.|.:.|.:....:.||..:..:....||
Yeast   207 SGDYRLIVVDSIMANFRVDYCGRGELSERQQKLNQHLFKLNRLAEEFNVAVFLTN 261

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-D	NP_733200.1	Rad51C	64..260	CDD:410900	45/158 (28%)
DMC1	NP_011106.1	recomb_DMC1	19..332	CDD:131292	57/185 (31%)