DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31007 and chchd2

DIOPT Version :10

Sequence 1:NP_733412.2 Gene:CG31007 / 318553 FlyBaseID:FBgn0051007 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001008432.1 Gene:chchd2 / 493261 XenbaseID:XB-GENE-993435 Length:154 Species:Xenopus tropicalis


Alignment Length:166 Identity:63/166 - (37%)
Similarity:82/166 - (49%) Gaps:29/166 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RRQSSRSSHVFATKPSRGSSKDLPAVQQPKKESLPAAAPAASAATSTETKGPSTA-----DRFKD 75
            |...||:|.| |...||.     ||::....   |||.|.|..|.:....||:.|     .....
 Frog     3 RGSRSRTSRV-APPASRA-----PAMRPAPP---PAAHPPAPVAQAPSALGPAAAAPRQPGLMAQ 58

  Fly    76 MATTAAGVAAGSAVGHAVGAGLTGMFQGRGQAAPAK-----EQPQQEGSLAASASQSVPKPQLVE 135
            |||||||||.||||||.:|..:||.|.|...|.||:     ::|.|........||..       
 Frog    59 MATTAAGVAVGSAVGHTIGHAITGGFGGGSSAEPARADITYQEPAQPMYQQQQQSQYT------- 116

  Fly   136 DGPCAFELRQFLKCTEDNSSDLSVCKEFNEAMQQCR 171
              ||.:|::|||:|.: |.|||.:|:.|.|.::|||
 Frog   117 --PCQYEMKQFLECAQ-NQSDLKLCEGFGEVLKQCR 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31007NP_733412.2 CHCH 139..173 CDD:429096 16/33 (48%)
chchd2NP_001008432.1 COG3416 <45..>93 CDD:442642 23/47 (49%)
CHCH 118..151 CDD:429096 16/33 (48%)

Return to query results.
Submit another query.