DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31007 and Chchd2

DIOPT Version :10

Sequence 1:NP_733412.2 Gene:CG31007 / 318553 FlyBaseID:FBgn0051007 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001385947.1 Gene:Chchd2 / 100910788 RGDID:6496638 Length:154 Species:Rattus norvegicus


Alignment Length:149 Identity:59/149 - (39%)
Similarity:79/149 - (53%) Gaps:15/149 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SRGSSKDLPAVQQPKKES----LPAAAPAASAATSTETKGPSTADR----FKDMATTAAGVAAGS 87
            ||.|....||.:.|:..:    .|||.|.|:||..:....|:.|.|    ...|||||||||.||
  Rat     7 SRTSRVTPPASRAPQMRAAPRRAPAAQPPATAAAPSAVGSPAAAPRQPGLMAQMATTAAGVAVGS 71

  Fly    88 AVGHAVGAGLTGMFQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCTED 152
            ||||.:|..:||.|.|...|.||:.      .:.....|..|.......|||:.|::|||:|.: 
  Rat    72 AVGHTLGHAITGGFSGGANAEPARP------DITYQEPQGAPLQNQQSFGPCSLEIKQFLECAQ- 129

  Fly   153 NSSDLSVCKEFNEAMQQCR 171
            |.||:.:|:.|||.::|||
  Rat   130 NQSDVKLCEGFNEVLRQCR 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31007NP_733412.2 CHCH 139..173 CDD:429096 16/33 (48%)
Chchd2NP_001385947.1 COG3416 <4..>94 CDD:442642 37/86 (43%)

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