DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG12056 and pgrmc2

Sequence 1:NP_572535.1 Gene:CG12056 FlyBaseID:FBgn0030099 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_998269.1 Gene:pgrmc2 ZFINID:ZDB-GENE-040426-2102 Length:201 Species:Danio rerio

Alignment Length:170 Identity:50/171 (29%)
Similarity:70/171 (41%) Gaps:30/171 (18%)


  Fly    14 LFVVAAVLGGIYHTEIRQFLRRQTDNYLDQAGQDASIPLAFQAGDDIGTLFTPAELAKFNGEEEG 78
            |.|:..||...|....|.:.|...|  |.: |.:|| ||......|    ||..:|..::|.:..
Zfish    39 LSVLVLVLAACYVLYARWWRRAGAD--LGR-GSEAS-PLPKMRRRD----FTLQQLRDYDGVQNP 95

  Fly    79 RPLYLALLGSVFDVSRGIKHYGSGCSYNFFVGRDASVSFISGDFETYDPETADDVLTLKPDDLIG 143
            | :.:|:...||||:.|.|.||....|..|.|||||....:...|       .|.|..:.|||..
Zfish    96 R-ILMAVNTKVFDVTSGKKFYGREGPYGIFAGRDASRGLATFCLE-------KDALRDEYDDLSD 152

  Fly   144 LAG--------WRDFYQKDYVYKGRVI------GRFYDEK 169
            |..        |...:.:.|.|.||::      ..:.||:
Zfish   153 LNAVQMESVREWEMQFMEKYDYVGRLLKPGDEPSEYTDEE 192

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG12056NP_572535.1 Cyt-b5 63..>117 CDD:278597 21/54 (39%)
pgrmc2NP_998269.1 Cyt-b5 80..178 CDD:278597 34/110 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1110
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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