DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12056 and pgrmc2

DIOPT Version :10

Sequence 1:NP_572535.1 Gene:CG12056 / 31855 FlyBaseID:FBgn0030099 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_998269.1 Gene:pgrmc2 / 406378 ZFINID:ZDB-GENE-040426-2102 Length:201 Species:Danio rerio


Alignment Length:170 Identity:50/170 - (29%)
Similarity:70/170 - (41%) Gaps:30/170 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LFVVAAVLGGIYHTEIRQFLRRQTDNYLDQAGQDASIPLAFQAGDDIGTLFTPAELAKFNGEEEG 78
            |.|:..||...|....|.:.|...|  |.: |.:|| ||......|    ||..:|..::|.:..
Zfish    39 LSVLVLVLAACYVLYARWWRRAGAD--LGR-GSEAS-PLPKMRRRD----FTLQQLRDYDGVQNP 95

  Fly    79 RPLYLALLGSVFDVSRGIKHYGSGCSYNFFVGRDASVSFISGDFETYDPETADDVLTLKPDDLIG 143
            | :.:|:...||||:.|.|.||....|..|.|||||....:...|       .|.|..:.|||..
Zfish    96 R-ILMAVNTKVFDVTSGKKFYGREGPYGIFAGRDASRGLATFCLE-------KDALRDEYDDLSD 152

  Fly   144 LAG--------WRDFYQKDYVYKGRVI------GRFYDEK 169
            |..        |...:.:.|.|.||::      ..:.||:
Zfish   153 LNAVQMESVREWEMQFMEKYDYVGRLLKPGDEPSEYTDEE 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12056NP_572535.1 Cyt-b5 65..>122 CDD:459698 20/56 (36%)
pgrmc2NP_998269.1 Cyt-b5 82..145 CDD:459698 23/70 (33%)

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