DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12056 and Pgrmc2

DIOPT Version :10

Sequence 1:NP_572535.1 Gene:CG12056 / 31855 FlyBaseID:FBgn0030099 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001008375.1 Gene:Pgrmc2 / 361940 RGDID:1308804 Length:217 Species:Rattus norvegicus


Alignment Length:174 Identity:50/174 - (28%)
Similarity:79/174 - (45%) Gaps:23/174 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VVAAVLGGIYHTEIRQFLRRQTDNYLDQAGQD---ASIPLAFQAGDDIGTLFTPAELAKFNGEEE 77
            :||.||.|.|...:|...|.....  ..||::   |::| ..:..|     |:..:|.:::|...
  Rat    54 LVALVLLGAYRLWVRWGRRGLCSG--PGAGEESPAATLP-RMKKRD-----FSLEQLRQYDGART 110

  Fly    78 GRPLYLALLGSVFDVSRGIKHYGSGCSYNFFVGRDAS--VSFISGDFETYDPETADDVLTLKPDD 140
            .| :.||:.|.||||::|.|.||....|..|.|||||  ::....|.:....| .||:..|....
  Rat   111 PR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDE-YDDLSDLNAVQ 173

  Fly   141 LIGLAGWRDFYQKDYVYKGRVI------GRFYDEKGALTTYHHK 178
            :..:..|...:::.|.|.||::      ..:.||:.  |..|.|
  Rat   174 MESVREWEMQFKEKYDYVGRLLKPGEEPSEYTDEED--TKDHSK 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12056NP_572535.1 Cyt-b5 65..>122 CDD:459698 21/58 (36%)
Pgrmc2NP_001008375.1 Cyt-b5 98..161 CDD:459698 22/63 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..217 5/22 (23%)

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