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Protein Alignment CG12056 and Pgrmc1
DIOPT Version :9
| Sequence 1: | NP_572535.1 |
Gene: | CG12056 / 31855 |
FlyBaseID: | FBgn0030099 |
Length: | 287 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_068534.2 |
Gene: | Pgrmc1 / 291948 |
RGDID: | 70890 |
Length: | 195 |
Species: | Rattus norvegicus |
| Alignment Length: | 189 |
Identity: | 52/189 - (27%) |
| Similarity: | 76/189 - (40%) |
Gaps: | 44/189 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 GLLRHLFKFQF--------LFVVAAVLGGIYHTEIRQFLRRQTDNYLDQAG------QDASIPLA 53
|||:.:|.... :|::..::.| ||.| .|...||.
Rat 20 GLLQEIFTSPLNLLLLGLCIFLLYKIVRG------------------DQPGASGDNDDDEPPPLP 66
Fly 54 FQAGDDIGTLFTPAELAKFNGEEEGRPLYLALLGSVFDVSRGIKHYGSGCSYNFFVGRDAS--VS 116
.....| ||||||.:::|.::.| :.:|:.|.||||::|.|.||....|..|.||||| ::
Rat 67 RLKPRD----FTPAELRRYDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLA 126
Fly 117 FISGDFETYDPETADDVLTLKPDDLIGLAGWRDFYQKDYVYKGRVIGRFYDEKGALTTY 175
....|.|....| .||:..|.|.....|..| ...:.:|...:|:...|....|.|
Rat 127 TFCLDKEALKDE-YDDLSDLTPAQQETLNDW----DSQFTFKYHHVGKLLKEGEEPTVY 180
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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