DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: CG12056 and Nenf

Sequence 1:NP_572535.1 Gene:CG12056 FlyBaseID:FBgn0030099 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001002851.1 Gene:Nenf RGDID:1303289 Length:171 Species:Rattus norvegicus

Alignment Length:136 Identity:49/137 (36%)
Similarity:73/137 (53%) Gaps:19/137 (14%)


  Fly    43 QAGQDASIPLAFQAGDDIGTLFTPAELAKFNGEEEGRPLYLALLGSVFDVSRGIKHYGSGCSYNF 107
            :|||   :|...:.|..: .|||..|||:::||||.:|:|||:.|.||||:.|.:.||.|..||.
  Rat    29 RAGQ---MPRPAERGPPV-RLFTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNA 89

  Fly   108 FVGRDAS--VSFISGDFETYDP-ETADDVLTLKPDDLIGLAGWRDFYQKDYVYKGRVIG----RF 165
            ..|:|:|  |:.:|     .|| :...|:..|...:|..|   .|.:.|.|..|..::|    |.
  Rat    90 LAGKDSSRGVAKMS-----LDPADLTHDISGLTAKELEAL---DDIFSKVYKAKYPIVGYTARRI 146

  Fly   166 YDEKGA 171
            .:|.|:
  Rat   147 LNEDGS 152

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG12056NP_572535.1 Cyt-b5 63..>117 CDD:278597 29/56 (52%)
NenfNP_001002851.1 Cyt-b5 45..>100 CDD:278597 29/55 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1110
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.