DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12056 and vem-1

DIOPT Version :10

Sequence 1:NP_572535.1 Gene:CG12056 / 31855 FlyBaseID:FBgn0030099 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001024770.1 Gene:vem-1 / 181066 WormBaseID:WBGene00006890 Length:183 Species:Caenorhabditis elegans


Alignment Length:164 Identity:39/164 - (23%)
Similarity:73/164 - (44%) Gaps:36/164 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FQF-----LFVVAAVLGGIYHTEIRQFLRRQTDNYLDQAGQDASIPLAFQAGDDIGTLFTPAELA 70
            |:|     :|:| .|||..::     :|.|..........:.|.:|::     |:    |..||.
 Worm     7 FEFTMYDAVFLV-VVLGFFFY-----WLTRSEQPLPAPPKELAPLPMS-----DM----TVEELR 56

  Fly    71 KFNGEEEGRPLYLALLGSVFDVSRGIKHYGSGCSYNFFVGRDASVSF-------ISGDFETYDPE 128
            |::|.:....|: .|.|:::||:||...||.|.:|....|.||:.:.       :|.:::.:...
 Worm    57 KYDGVKNEHILF-GLNGTIYDVTRGKGFYGPGKAYGTLAGHDATRALGTMDQNAVSSEWDDHTGI 120

  Fly   129 TADDVLTLKPDDLIGLAGWRDFYQKDYVYKGRVI 162
            :||:..|...        |...::..|:..||::
 Worm   121 SADEQETANE--------WETQFKFKYLTVGRLV 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12056NP_572535.1 Cyt-b5 65..>122 CDD:459698 20/63 (32%)
vem-1NP_001024770.1 Cyt-b5 51..>102 CDD:459698 19/51 (37%)

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