DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT2 and TCP1

DIOPT Version :9

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_010498.1 Gene:TCP1 / 851798 SGDID:S000002620 Length:559 Species:Saccharomyces cerevisiae


Alignment Length:533 Identity:184/533 - (34%)
Similarity:293/533 - (54%) Gaps:40/533 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RLSSFIGAIAIGDLVKSTLGPKGMDKILVATGRNAGHVEVTNDGATILRAVGVDNPAAKILVDMS 88
            |..:.:..:|:.::|||:|||.|:||:||   .:.|...|||||||||..:.|.:||.||||:::
Yeast    26 RNQNVLATMAVANVVKSSLGPVGLDKMLV---DDIGDFTVTNDGATILSLLDVQHPAGKILVELA 87

  Fly    89 RVQDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVALEALTAAAQDNSSSDE 153
            :.||.|:|||||||.::|||||:.|.:||:.|:||..|::|:|.|.:.|:..:....  ::|.|.
Yeast    88 QQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVL--STSVDT 150

  Fly   154 KFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRLK---GSGEL----KSIQIIKKSGGTLGD 211
            ..:..|:|||:|::||||:....|||:|:.|||::.:|   ..||:    |::.::|..|.:..:
Yeast   151 LGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATE 215

  Fly   212 SFLDEGFLLD-KKPGVHQPQRIENARILIANTPMDTDKIKV-FGSSIKVDSLAKIADLEMAEKEK 274
            |.|..|:.|: .......|:||....:.||...::..|.:: .|..|.:|...::..:...|...
Yeast   216 SLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGI 280

  Fly   275 MKEKVDKILKHKCNVFINRQLIYNYPEQLFADARVMSIEHADFDGIERLAYCTGGEIVS------ 333
            :.|:|.||:.....|.:..:.|.:...:.|.:|::|.:.....:.:.|:|..||..:||      
Yeast   281 VLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIARATGATLVSSMSNLE 345

  Fly   334 ---TFENPSLVKLGECDVIEQVMIGEDTLLRFSGVKLGEACTIVIRGATQQILDEADRSLHDALC 395
               |||:.   .||.||.:.|....:|..:...|.....:.:|::|||....|||.:|||||:|.
Yeast   346 GEETFESS---YLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLS 407

  Fly   396 VLAATVKESRIIFGGGCSEALMATAVLKKAAETPG-KEAIAIEAFARALLSLPTAIADNAGYDSA 459
            |:..|::...::.||||.||.: ...|...|.|.| :|.:||..||.|||.:|..:|.||..||:
Yeast   408 VVKRTLESGNVVPGGGCVEAAL-NIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSS 471

  Fly   460 QLVSELRAGHAQGK------------QTLGLDMELGKVADVRELGITESFAVKRQVLMSASEAAE 512
            :||::||:.||..:            :..|||:..||:.|....|:.|....|.:.|.||.||..
Yeast   472 ELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACV 536

  Fly   513 MILRVDNIIRCAP 525
            .|||:|.:|...|
Yeast   537 AILRIDTMITVDP 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 184/533 (35%)
TCP1_beta 10..527 CDD:239452 184/533 (35%)
TCP1NP_010498.1 TCP1_alpha 17..549 CDD:239451 183/531 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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