DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT2 and Hsp60D

DIOPT Version :10

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster


Alignment Length:570 Identity:123/570 - (21%)
Similarity:232/570 - (40%) Gaps:113/570 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ARLSSFIGAIAIGDLVKSTLGPKG----MDKILVATGRNAGHVEVTNDGATILRAVGVDN----P 79
            ||.....|...:.:.|.:||||||    ::::|::.       .:|.||.|:...|.:.|    .
  Fly    26 ARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISP-------RITKDGITVANNVQLGNRRQDM 83

  Fly    80 AAKILVDMSRVQDEEVGDGTTSVTVLASELLREAEKLVEQ-KLHPQIIVSGWRQATQVALEALTA 143
            ..::|...:...:.:||||||:.|:||..:..:...::.| |::.|::..|..:.::...:||..
  Fly    84 GVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDALGE 148

  Fly   144 AAQDNSSSDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRLKGSGELKSIQIIKKSGGT 208
            .:|   |.|        .|.:....:|:.....:..|.|..|.::.|..||    :.::|:|...
  Fly   149 MSQ---SVD--------TIGQVEAVAKVALNGDERLAELIGDIILELGDSG----VILLKESHSP 198

  Fly   209 LGDSFLDEGFLLDKKPGVHQP--------QRIENARILIANTPMDTDKIKVFGSSIKVDSLAKIA 265
            ..::.:.||..:  ..|.:.|        ..:||..:|:              :..|:|.:.:| 
  Fly   199 FDEAKIQEGITI--ASGYYSPFFAKQSHTLELENCLLLL--------------TLAKIDQVEQI- 246

  Fly   266 DLEMAEKEKMKEKVDKILKHKCNVFINRQLIYNYPEQLFADARVMSIEHADF-----DGIERLAY 325
             |...|..::||:...|:.......:.:.|:.|   .|....:|.:::...|     :.:|.:|:
  Fly   247 -LPALELARLKERPLLIIAKNFGSDLLKILVLN---NLQGRVQVCAVKAPSFGDEQCEEMEDIAF 307

  Fly   326 CTGGEIVSTFENPSLVKLGECD---VIEQVMIGEDTLL------------------------RFS 363
            .|||.::.  :..||..|.|.|   |:|.|:..::|.|                        .|:
  Fly   308 ATGGHLLE--DASSLADLSEEDLGEVMEAVVDAKETHLLQPINVNEEQVQCRIQDIRELIDEAFT 370

  Fly   364 GVKL-----------GEACTIVIRGATQQILDEADRSLHDALCVLAATVKESRIIFGGGCSEALM 417
            .|:|           |...||.:.|.::..:.|.....:|||..:...:.:. ::.||| :..|.
  Fly   371 DVELDRLKTRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAVRVAISDG-VVPGGG-TAYLR 433

  Fly   418 ATAVLKKAAETPGKEAIAIEAFARALLSLPT-AIADNAGYDSAQLVSELRAGHAQGKQTLGLDME 481
            ...||.:...|...|........:..|.||. .||.|||.|..:::..:    .:|....|.|..
  Fly   434 CIPVLDELPPTDIMELQVGREIVKDALRLPCYTIARNAGVDPNEVLRRV----LKGSGNYGYDAA 494

  Fly   482 LGKVADVRELGITESFAVKRQVLMSASEAAEMILRVDNIIRCAPRR-RVP 530
            .|:..|:...||.:...|.:..:.||:..|.::...:.:|...|.: ::|
  Fly   495 AGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATTEVLITKQPTKPKIP 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 TCP1_beta 10..527 CDD:239452 122/564 (22%)
Hsp60DNP_609656.1 GroEL 18..536 CDD:239460 121/560 (22%)

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