DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT2 and Cct7

DIOPT Version :9

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001100073.1 Gene:Cct7 / 297406 RGDID:1306422 Length:544 Species:Rattus norvegicus


Alignment Length:539 Identity:195/539 - (36%)
Similarity:301/539 - (55%) Gaps:24/539 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MSLNPVRVLKNEAQEEKAEMARLSSFIGAI-AIGDLVKSTLGPKGMDKILVATGRNAGHVEVTND 66
            |...||.:|| |..:....:.:|.|.|.|. .|.:.|::||||:||||::| .||  |...::||
  Rat     1 MMPTPVILLK-EGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIV-DGR--GKATISND 61

  Fly    67 GATILRAVGVDNPAAKILVDMSRVQDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWR 131
            |||||:.:.|.:||||.|||:::.||.||||||||||:||:|.|::.:..||:.||||||:..:|
  Rat    62 GATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFR 126

  Fly   132 QATQVALE-----ALTAAAQDNSSSDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRLK 191
            .|||:|:.     |:|...||....    |..|...|.|.||||::.|.|.|||.:.|||||.|.
  Rat   127 TATQLAVNKIKEIAVTVKKQDKVEQ----RKMLEKCAMTALSSKLISQQKVFFAKMVVDAVMMLD 187

  Fly   192 GSGELKSIQIIKKSGGTLGDSFLDEGFLLDKK---PGVH-QPQRIENARILIANTPMDTDKIKVF 252
            ...:||.|.|.|..||.|.:|.|..|....|.   .|.. ||::.:|.:|.:.|..::. |.:..
  Rat   188 ELLQLKMIGIKKVQGGALEESRLVAGVAFKKTFSYAGFEMQPKKYKNPKIALLNVELEL-KAEKD 251

  Fly   253 GSSIKVDSLAKIADLEMAEKEKMKEKVDKILKHKCNVFINRQLIYNYPEQLFADARVMSIEHADF 317
            .:.|:|.::.....:..||...:.:|::||.:....|.:::..|.:...|.|||..:........
  Rat   252 NAEIRVHTVEDYQAIVDAEWNILYDKLEKIHQSGAKVILSKLPIGDVATQYFADRDMFCAGRVPE 316

  Fly   318 DGIERLAYCTGGEIVSTFENPSLVK--LGECDVIEQVMIGEDTLLRFSGVKLGEACTIVIRGATQ 380
            :.::|.....||.|.::..  :|:.  ||.|.|.|:..||.:....|:|....:.|||::||..:
  Rat   317 EDLKRTMMACGGSIQTSVN--ALIPDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAE 379

  Fly   381 QILDEADRSLHDALCVLAATVKESRIIFGGGCSEALMATAVLKKAAETPGKEAIAIEAFARALLS 445
            |.::|.:||||||:.::...:|...::.|||..|..::..:...:...|||:.:.|.|:|:||..
  Rat   380 QFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEI 444

  Fly   446 LPTAIADNAGYDSAQLVSELRAGHAQGKQTLGLDMELGKVADVRELGITESFAVKRQVLMSASEA 510
            :|..:.||||:|:..::::|||.||||....|:|:....:||..:..:.|...|:...|.:||||
  Rat   445 IPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINNEDIADNFQAFVWEPAMVRINALTAASEA 509

  Fly   511 AEMILRVDNIIRCAPRRRV 529
            |.:|:.||..|: .||..|
  Rat   510 ACLIVSVDETIK-NPRSTV 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 195/539 (36%)
TCP1_beta 10..527 CDD:239452 190/528 (36%)
Cct7NP_001100073.1 TCP1_eta 5..525 CDD:239456 192/531 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 1 1.010 - - D205390at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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