DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT2 and Tcp1

DIOPT Version :10

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_038714.2 Gene:Tcp1 / 21454 MGIID:98535 Length:556 Species:Mus musculus


Alignment Length:43 Identity:10/43 - (23%)
Similarity:15/43 - (34%) Gaps:13/43 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 YSYFIDVVHGIIP-------------PRQTSVNAAIRMPNSVC 129
            ||..:.|....||             ..:|:|.|...:.|:.|
Mouse   170 YSSLLSVCPRYIPGTCELNKLKCANITNETAVTACYNLNNTYC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 TCP1_beta 10..527 CDD:239452 10/43 (23%)
Tcp1NP_038714.2 TCP1_alpha 9..535 CDD:239451 10/43 (23%)

Return to query results.
Submit another query.