DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT2 and Tcp1

DIOPT Version :9

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_038714.2 Gene:Tcp1 / 21454 MGIID:98535 Length:556 Species:Mus musculus


Alignment Length:535 Identity:186/535 - (34%)
Similarity:306/535 - (57%) Gaps:28/535 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EMARLSSFIGAIAIGDLVKSTLGPKGMDKILVATGRNAGHVEVTNDGATILRAVGVDNPAAKILV 85
            |..|..:.:.|.:|.::|||:.||.|:||:||   .:.|.|.:||||||||:.:.|::||||:|.
Mouse    15 EAVRSQNVMAAASIANIVKSSFGPVGLDKMLV---DDIGDVTITNDGATILKLLEVEHPAAKVLC 76

  Fly    86 DMSRVQDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVALEALTAAAQDNSS 150
            :::.:||:|||||||||.::|:|||:.|::||:||:||..::||:|.|.:.|:..:......|  
Mouse    77 ELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIIN-- 139

  Fly   151 SDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRLK---GSGE----LKSIQIIKKSGGT 208
            :||..|:.|:|.|:|::||||:..:.|:|||:.||||:.:|   ..|:    :.|:.|:|..|.:
Mouse   140 TDELGRDCLINAAKTSMSSKIIGINGDYFANMVVDAVLAVKYTDARGQPRYPVNSVNILKAHGRS 204

  Fly   209 LGDSFLDEGFLLDKKPGVH-QPQRIENARILIANTPMDTDKIKVFGSSIKVDSLAKIADLEMAEK 272
            ..:|.|..|:.|:...|.. .|:||.||:|...:..:...|:|: |..:.:....|:..:...|.
Mouse   205 QIESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKL-GVQVVITDPEKLDQIRQRES 268

  Fly   273 EKMKEKVDKILKHKCNVFINRQLIYNYPEQLFADARVMSIEHADFDGIERLAYCTGGEIVSTFEN 337
            :..||::.|||....||.:....|.:...:.|.:|..|::.......::.:|..:|..|:||..|
Mouse   269 DITKERIQKILATGANVILTTGGIDDMYLKYFVEAGAMAVRRVLKRDLKHVAKASGASILSTLAN 333

  Fly   338 P------SLVKLGECDVIEQVMIGEDTLLRFSGVKLGEACTIVIRGATQQILDEADRSLHDALCV 396
            .      .:..||:.:.:.|..|.:|.|:.....|...:.:|::|||...:.||.:|||||||||
Mouse   334 LEGEETFEVTMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCV 398

  Fly   397 LAATVKESRIIFGGGCSEALMATAVLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYDSAQL 461
            :...::...::.|||..||.::..:...|.....:|.:||..|||:||.:|..:|.||..||..|
Mouse   399 VKRVLELKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDL 463

  Fly   462 VSELRAGHAQGK--------QTLGLDMELGKVADVRELGITESFAVKRQVLMSASEAAEMILRVD 518
            |::|||.|.:.:        :.:|||:..||..|.::.|:.|...||.:.|..|:|||..|||:|
Mouse   464 VAKLRAFHNEAQVNPERKNLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRID 528

  Fly   519 NIIRCAPRRRVPDRG 533
            ::|:..|..:....|
Mouse   529 DLIKLHPESKDDKHG 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 185/530 (35%)
TCP1_beta 10..527 CDD:239452 185/527 (35%)
Tcp1NP_038714.2 chap_CCT_alpha 5..540 CDD:274081 185/530 (35%)
TCP1_alpha 9..535 CDD:239451 184/525 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 1 1.010 - - D205390at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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