DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10962 and AT5G61830

DIOPT Version :10

Sequence 1:NP_788887.1 Gene:CG10962 / 31824 FlyBaseID:FBgn0030073 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_200991.1 Gene:AT5G61830 / 836305 AraportID:AT5G61830 Length:316 Species:Arabidopsis thaliana


Alignment Length:264 Identity:72/264 - (27%)
Similarity:109/264 - (41%) Gaps:57/264 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RWQN--RVAVISGASSGIGAACARLLVAAGLQVVGLARRTDR-LEQLRQSLPAEQRMRFHQHKCD 64
            ||.:  .|||::|::.|||...||.|...||.||..||..:. ||.::.....|:.::.:.|:.|
plant    31 RWWSCENVAVVTGSNRGIGFEIARQLAVHGLTVVLTARNVNAGLEAVKSLRHQEEGLKVYFHQLD 95

  Fly    65 VSQELQVDTAFEWIEKELGGIDVLINNAGI--VLGGQLIDMPTKDINNILQTNLMGSIYCTKLAA 127
            |:....:.....|:::..||:|:|:||||:  .||.   |...:....::.||..|:...||...
plant    96 VTDSSSIREFGCWLKQTFGGLDILVNNAGVNYNLGS---DNTVEFAETVISTNYQGTKNMTKAMI 157

  Fly   128 SSMRRRQVAGHLIFVNSTAG-VAGYK--------------PDPADESL----------------- 160
            ..||.......::.|:|..| |.|.:              ||...|.|                 
plant   158 PLMRPSPHGARVVNVSSRLGRVNGRRNRLANVELRDQLSSPDLLTEELIDRTVSKFINQVKDGTW 222

  Fly   161 ---------NAYTPSKFALTAVQEICRQELINQG--SKIKTTSINPGWVATEI------VPDETK 208
                     ..|:.||.|:.|...:..:||..:|  .||...|..||||.|.:      :|.|..
plant   223 ESGGWPQTFTDYSMSKLAVNAYTRLMAKELERRGEEEKIYVNSFCPGWVKTAMTGYAGNMPPEDA 287

  Fly   209 AKLG 212
            |..|
plant   288 ADTG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10962NP_788887.1 YdfG 5..245 CDD:443365 70/262 (27%)
AT5G61830NP_200991.1 carb_red_PTCR-like_SDR_c 38..316 CDD:187585 70/257 (27%)

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