DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10962 and NYC1

DIOPT Version :10

Sequence 1:NP_788887.1 Gene:CG10962 / 31824 FlyBaseID:FBgn0030073 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_567400.1 Gene:NYC1 / 826942 AraportID:AT4G13250 Length:496 Species:Arabidopsis thaliana


Alignment Length:288 Identity:84/288 - (29%)
Similarity:123/288 - (42%) Gaps:63/288 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RVAVISGASSGIGAACARLLVAAGLQVVGLARRTDRLE----QLRQSL-------PAEQRMRFHQ 60
            |..||:|::.|:|.|.||..:.:|.:|:..:|.::.::    :|.|:|       ....|.:...
plant   162 RNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSD 226

  Fly    61 HK-----CDVSQELQVDTAFEWIEKELGGIDVLINNAGIVLGGQ-LIDMPTKDINNILQTNLMGS 119
            .|     |||.:...|:....:..||||.|::.|||||...|.: |::...:||..|:.|||:||
plant   227 AKVVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTNLIGS 291

  Fly   120 IYCTKLAASSMRRRQVAGHLIFVNSTAGVAGYKPDPADESLNA-YTPSKFAL------------- 170
            |.||:.|...|.|:...|| ||....||..|     :...|.| |..:|..|             
plant   292 ILCTRGAMDVMSRQHSGGH-IFNMDGAGSGG-----SSTPLTAVYGSTKCGLRQFHGSIVKESQK 350

  Fly   171 ------TAVQEICRQELINQGSKIKTTSI------NPGWVATEIVPDETKAKLGEVILQADDVAQ 223
                  ||...:...||:..||.||...:      .|..||..:||.....|         ...:
plant   351 TNVGLHTASPGMVLTELLLSGSSIKNKQMFNIICELPETVARTLVPRMRVVK---------GSGK 406

  Fly   224 AVLYALSTPPHTQVEQIT--LRAVGEYF 249
            ||.|.  |||...:..:|  ||. |.:|
plant   407 AVNYL--TPPRILLAIVTSWLRR-GRWF 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10962NP_788887.1 YdfG 5..245 CDD:443365 82/282 (29%)
NYC1NP_567400.1 SDR_c 164..395 CDD:212491 69/236 (29%)

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