DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10962 and Hsdl2

DIOPT Version :10

Sequence 1:NP_788887.1 Gene:CG10962 / 31824 FlyBaseID:FBgn0030073 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_651578.1 Gene:Hsdl2 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster


Alignment Length:267 Identity:65/267 - (24%)
Similarity:113/267 - (42%) Gaps:56/267 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RVAVISGASSGIGAACARLLVAAGLQVVGLARRTDRLEQLRQSL--PAE--QRMRFHQHKC--DV 65
            |...|:|||.|||...|......|..:|..|:..:...:|..::  .||  ::.....:.|  ||
  Fly    10 RTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIEKAGGKAYPCVVDV 74

  Fly    66 SQELQVDTAFEWIEKELGGIDVLINNAGIVLGGQLIDMPTKD------INNILQTNLMGSIYCTK 124
            ..|.||.:|.|....:.||||::||||..:   .|.:.|..|      ::||   |..|:...:|
  Fly    75 RDEQQVRSAVEAAVAKFGGIDIVINNASAI---SLTNTPDTDMKRYDLMHNI---NTRGTFLVSK 133

  Fly   125 LAASSMRRRQVAGHLIFVNSTAGVAGYKPDPADESLNAYTPSKFALTAVQEICRQELINQGSKIK 189
            :....:::...| |::.::....:   ||......: |||.:|:.::    :|   ::...::.|
  Fly   134 VCLPYLKKSNHA-HILNISPPLSM---KPKWFGPHV-AYTMAKYGMS----MC---VLGMAAEFK 186

  Fly   190 T--TSINPGWVATEI---------VPDETK-AKLGEVILQADDVAQAVLYALSTPPHTQVEQITL 242
            .  .|:|..|..|.|         .||..| ::..|::..|       .||:.|....|      
  Fly   187 DEGISVNALWPRTAIHTAAIEMLTGPDSAKWSRKPEIMADA-------AYAILTREPRQ------ 238

  Fly   243 RAVGEYF 249
             :.|::|
  Fly   239 -STGQFF 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10962NP_788887.1 YdfG 5..245 CDD:443365 63/261 (24%)
Hsdl2NP_651578.1 PRK08278 7..277 CDD:181349 65/267 (24%)
SCP2 306..408 CDD:442486
Blue background indicates that the domain is not in the aligned region.

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