DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10962 and sni

DIOPT Version :10

Sequence 1:NP_788887.1 Gene:CG10962 / 31824 FlyBaseID:FBgn0030073 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_572466.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster


Alignment Length:235 Identity:56/235 - (23%)
Similarity:99/235 - (42%) Gaps:39/235 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VISGASSGIGAACARLLV---AAGLQVVGLARRTDRLEQLRQSLPAEQRMRFH-----QHKCDVS 66
            :|:|.:.|:|....:.|:   .....:....|..::.::|...  |:.....|     ....|..
  Fly     5 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL--AKNHSNIHILEIDLRNFDAY 67

  Fly    67 QELQVDTAFEWIEKELGGIDVLINNAGIV-LGGQLIDMPTKDINNILQTNLMGSIYCTKLAASSM 130
            .:|..|  .|.:.|: .|::||.|||||. ...::..:.::::.:.||||.:..|...|.....:
  Fly    68 DKLVAD--IEGVTKD-QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLL 129

  Fly   131 RRRQVA--------GHLIFVNSTAGVAGYKPDPADESLNAYTPSKFALTAVQEICRQELINQGSK 187
            ::...|        |....:|.:: :.|......|..:.||..||.||.|..:....:|..|  :
  Fly   130 KKAAKANESQPMGVGRAAIINMSS-ILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQ--R 191

  Fly   188 IKTTSINPGWVATEI--------VPD------ETKAKLGE 213
            |...|::||||.|::        ||.      :|.:||||
  Fly   192 IMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGE 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10962NP_788887.1 YdfG 5..245 CDD:443365 56/235 (24%)
sniNP_572466.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 56/235 (24%)

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