DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10962 and dhs-18

DIOPT Version :10

Sequence 1:NP_788887.1 Gene:CG10962 / 31824 FlyBaseID:FBgn0030073 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_505812.1 Gene:dhs-18 / 179529 WormBaseID:WBGene00000981 Length:293 Species:Caenorhabditis elegans


Alignment Length:212 Identity:52/212 - (24%)
Similarity:83/212 - (39%) Gaps:36/212 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RVAVISGASSGIGAACARLLVAAGLQVVGLARRTDRLEQLRQSL---PAE-QRMRFHQHKC--DV 65
            :...|:|||.|||...|..|...|..:|..|:......:|..::   .|| ::...|...|  ||
 Worm    14 KTVFITGASRGIGKEIALKLAKDGANIVVAAKTATAHPKLPGTIYTAAAEIEKAGGHALPCVVDV 78

  Fly    66 SQELQVDTAFEWIEKELGGIDVLINNAGIVLGGQLIDMPTKDINNILQTNLMGSIYCTKLAASSM 130
            ..|..|..|.:...|:.||||:|||||..:......|...|..:.:...|..|:...||.....:
 Worm    79 RDEAAVKAAVDAAVKKFGGIDILINNASAISLTNTEDTDMKRYDLMHSINTRGTYLLTKTCLPYL 143

  Fly   131 RRRQVAGHLIFVNSTAGVAGYKPDPADESLN------AYTPSKFALTAVQEIC----RQELINQG 185
            ::.: ..|::.::          .|.|....      .||.:||.::    :|    .:|....|
 Worm   144 KKGK-NPHVLNIS----------PPLDMEAKWFGPHVGYTMAKFGMS----MCVLGHHEEFRPYG 193

  Fly   186 SKIKTTSINPGWVATEI 202
                 .::|..|..|.|
 Worm   194 -----IAVNALWPLTAI 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10962NP_788887.1 YdfG 5..245 CDD:443365 52/212 (25%)
dhs-18NP_505812.1 PRK08278 11..279 CDD:181349 52/212 (25%)

Return to query results.
Submit another query.