DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIP and SGT2

DIOPT Version :10

Sequence 1:NP_570074.3 Gene:HIP / 318211 FlyBaseID:FBgn0260484 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_014649.1 Gene:SGT2 / 854168 SGDID:S000005533 Length:346 Species:Saccharomyces cerevisiae


Alignment Length:325 Identity:77/325 - (23%)
Similarity:132/325 - (40%) Gaps:71/325 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GKCPFGG-----VAGAKANEPANAPEDSEDEKSLSDPESDVELDMEGVIEADSDPAQPMGNYSKK 117
            ||..|.|     :..:.:..|.:..:|..:...::.||.|.|                     .|
Yeast    56 GKSEFKGQHLADILNSASRVPESNKKDDAENVEINIPEDDAE---------------------TK 99

  Fly   118 ATEEEVEQASELRAQAASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKKPNACIRD 182
            |      :|.:|:.|...|...:.::.||..||:||::.|.||:::|.|..|...||:.:..::|
Yeast   100 A------KAEDLKMQGNKAMANKDYELAINKYTEAIKVLPTNAIYYANRAAAHSSLKEYDQAVKD 158

  Fly   183 CDVALELNSDLAAGYKFRGRARRLLGDFELAAHDLRQACKLDFDEETDEWLKEVTPNAKKIEQHR 247
            .:.|:.::.....||...|.|:...|..|.|....::...::.|..|:...::.....||:||  
Yeast   159 AESAISIDPSYFRGYSRLGFAKYAQGKPEEALEAYKKVLDIEGDNATEAMKRDYESAKKKVEQ-- 221

  Fly   248 LKQERRQAERKIKERQRDQRRARKEQEKHNASSGGSSGEFSGGNPGNGNM--SDILGAMSDPEVS 310
                ....|:.:.|:.||            |....|.|..:||.|..|::  ..:.|.|::|::.
Yeast   222 ----SLNLEKTVPEQSRD------------ADVDASQGASAGGLPDLGSLLGGGLGGLMNNPQLM 270

  Fly   311 AAIQDILSNPG---NITKYASNPKIYNLIKKIVPGGD----------------VGAAFGQAGEKA 356
            .|.|.::||||   ||.|...:|.|..:.:....||.                .|..||.||.::
Yeast   271 QAAQKMMSNPGAMQNIQKMMQDPSIRQMAEGFASGGGTPNLSDLMNNPALRNMAGNLFGGAGAQS 335

  Fly   357  356
            Yeast   336  335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIPNP_570074.3 Hip_N 10..47 CDD:271228
TPR repeat 126..154 CDD:276809 9/27 (33%)
NlpI <139..269 CDD:443815 33/129 (26%)
TPR repeat 159..189 CDD:276809 9/29 (31%)
TPR repeat 194..222 CDD:276809 7/27 (26%)
STI1 299..336 CDD:128966 14/39 (36%)
SGT2NP_014649.1 SGTA_dimer 7..71 CDD:465168 4/14 (29%)
NlpI 41..221 CDD:443815 43/191 (23%)
TPR repeat 102..130 CDD:276809 9/27 (33%)
TPR repeat 135..165 CDD:276809 9/29 (31%)
TPR repeat 170..198 CDD:276809 7/27 (26%)
STI1 264..298 CDD:128966 13/33 (39%)
Blue background indicates that the domain is not in the aligned region.

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