DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIP and CNS1

DIOPT Version :10

Sequence 1:NP_570074.3 Gene:HIP / 318211 FlyBaseID:FBgn0260484 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_009713.1 Gene:CNS1 / 852452 SGDID:S000000359 Length:385 Species:Saccharomyces cerevisiae


Alignment Length:259 Identity:60/259 - (23%)
Similarity:92/259 - (35%) Gaps:69/259 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GGTVPPGQFNGGSAGGKCPFGGVAGAKANEPANAPEDSEDEKSLSD----------------PES 91
            ||...|.::..|               ..:|...|:.||.:...||                .|:
Yeast     8 GGYTKPQKYVPG---------------PGDPELPPQLSEFKDKTSDEILKEMNRMPFFMTKLDET 57

  Fly    92 D------VELDMEGVIEADSDPAQPMGNYSKKATEEEVEQASELRAQAASAYGQQKFDEAIALYT 150
            |      |||:....:..:.:|.:...|:.|        |.:||       |..::|.:|..||:
Yeast    58 DGAGGENVELEALKALAYEGEPHEIAENFKK--------QGNEL-------YKAKRFKDARELYS 107

  Fly   151 K--AIELSPG--NALFHAKRGQAFLKLKKPNACIRDCDVALELNSDLAAGYKFRGRARRLLGDFE 211
            |  |:|....  |...:|.|....|:||....||.||..||.:|......|....:|...|...|
Yeast   108 KGLAVECEDKSINESLYANRAACELELKNYRRCIEDCSKALTINPKNVKCYYRTSKAFFQLNKLE 172

  Fly   212 LAAHDLRQACKLDFDEETDEWLKEVTPNAKKIEQHRLKQERRQAERKIKERQRDQRRARKEQEK 275
            .|......|            .:.:.|..|.|.......:|::.|.|.|| ::.||.|::.:.|
Yeast   173 EAKSAATFA------------NQRIDPENKSILNMLSVIDRKEQELKAKE-EKQQREAQERENK 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIPNP_570074.3 Hip_N 10..47 CDD:271228 2/3 (67%)
TPR repeat 126..154 CDD:276809 9/29 (31%)
NlpI <139..269 CDD:443815 36/133 (27%)
TPR repeat 159..189 CDD:276809 12/29 (41%)
TPR repeat 194..222 CDD:276809 6/27 (22%)
STI1 299..336 CDD:128966
CNS1NP_009713.1 3a0801s09 68..>218 CDD:273380 43/177 (24%)
TPR repeat 83..111 CDD:276809 11/42 (26%)
TPR repeat 120..150 CDD:276809 12/29 (41%)
CTWD_TTC4 221..374 CDD:439175 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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