DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIP and STUB1

DIOPT Version :10

Sequence 1:NP_570074.3 Gene:HIP / 318211 FlyBaseID:FBgn0260484 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_477441.1 Gene:STUB1 / 34433 FlyBaseID:FBgn0027052 Length:289 Species:Drosophila melanogaster


Alignment Length:174 Identity:47/174 - (27%)
Similarity:82/174 - (47%) Gaps:31/174 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 ELRAQAASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKKPNACIRDCDVALELNSD 192
            :|:.|....:..:|:|:||..|:|||..:|.||.:...|....||||:...|.:|...||:::.:
  Fly    16 QLKEQGNCLFAARKYDDAINCYSKAIIKNPTNATYFTNRALCNLKLKRWELCCQDSRRALDIDGN 80

  Fly   193 LAAGYKFRGRARRLLGDFELA------AHDLRQACKLDFDEETDEWLKEVTPNAKK-----IEQH 246
            |..|:.|.|:....:.:|:.|      |:||.:..|.:|.::....|:    .|:|     :|:.
  Fly    81 LLKGHFFLGQGLMEIDNFDEAIKHLQRAYDLSKEQKQNFGDDITLQLR----LARKKRWNVMEEK 141

  Fly   247 RLKQ----------------ERRQAERKIKERQRDQRRARKEQE 274
            |::|                |.|.|..|:.....|::...|:||
  Fly   142 RIQQEIELQSYLNGLIKGDMESRLANLKLNGNVHDEQLKDKQQE 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIPNP_570074.3 Hip_N 10..47 CDD:271228
TPR repeat 126..154 CDD:276809 9/25 (36%)
NlpI <139..269 CDD:443815 42/156 (27%)
TPR repeat 159..189 CDD:276809 11/29 (38%)
TPR repeat 194..222 CDD:276809 8/33 (24%)
STI1 299..336 CDD:128966
STUB1NP_477441.1 TPR repeat 17..42 CDD:276809 9/24 (38%)
TPR 21..>111 CDD:440225 27/89 (30%)
TPR repeat 47..77 CDD:276809 11/29 (38%)
TPR repeat 82..110 CDD:276809 6/27 (22%)
CHIP_TPR_N 130..211 CDD:436460 13/56 (23%)
RING-Ubox_CHIP 213..283 CDD:438316
Blue background indicates that the domain is not in the aligned region.

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