Protein Alignment Rbm13 and AT1G23280

DIOPT Version :9

• Sequence 1: NP_001285026.1
• Gene: Rbm13 / 31818
• FlyBaseID: FBgn0030067
• Length: 343
• Species: Drosophila melanogaster
• Sequence 2: NP_173742.1
• Gene: AT1G23280 / 838937
• AraportID: AT1G23280
• Length: 303
• Species: Arabidopsis thaliana
• Alignment Length: 344
• Identity: 143/344 - (41%)
• Similarity: 209/344 - (60%)
• Gaps: 47/344 - (13%)

  Fly     1 MQHDDVVWSIINKSFCSHKVKTDTRTFCRHEYNLTGLCTRRTCPLANSQYATVREEKGIIYLFIK 65
            ||||:|:|.:|....||:..|.:|..|||::||:||:|.|.:||||||:|||:|:..|:.||::|
plant     1 MQHDEVIWQVIRHKHCSYMAKIETGIFCRNQYNVTGICNRSSCPLANSRYATIRDHDGVFYLYMK 65

  Fly    66 TAERAHMPSKLWERIKLSRNFEKAIEQINENLVFWPKYMIAKNKQRFLKITQYLIRMRRLKLRRQ 130
            |.||||||:|||||:||..|:|||:|.|:::|::|||.:..|.|||..|:||..||||:|.|:.:
plant    66 TIERAHMPNKLWERVKLPVNYEKALEMIDKHLLYWPKLLQHKVKQRLTKMTQMRIRMRKLALKTR 130

  Fly   131 KLIVPLSTKIERREARREEKALVAAKIDNHIEKALMDRLKNGTY-RDIYNFSQTAFNKALEAERV 194
            :::|....:..:||:||||||:.||::|..||..||:|||.|.| .:|||.|.:.|||.|
plant   131 EVVVTTPRRQIKRESRREEKAIKAAQLDKAIETELMERLKKGIYPTEIYNLSDSVFNKLL----- 190

  Fly   195 DEDDEEELDDEDENEEQLEREME-VDGDDSREAEEVQRSLLDEEFVEADTDDEEEDDDDDDDDDE 258
              |.|.|.:||.|.||:.|..:| |:|||..||||                          ::|.
plant   191 --DREIETNDEVEKEEEEEGVIEYVEGDDELEAEE--------------------------EEDM 227

  Fly   259 DDYDSDSGKREEVEVGSDFEESDEDDDADADDIEETKVPAKKTASKAKKDKKSPAGNSRRSRSKP 323
            :|:.....|...:| |.|.:..||||    ||.||..|..||..:..|.|      ::.:::.||
plant   228 EDFSGLPSKESYLE-GDDHDSDDEDD----DDAEEQVVIHKKGRALKKSD------DNGKAKKKP 281

  Fly   324 KLQLEYEYEVEKEAQRQMR 342
            ::.:|.|.| :.:.:|.::
plant   282 RVVVEVEQE-DADTRRSLK 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbm13	NP_001285026.1	PLN00040	1..225	CDD:215038	114/225 (51%)
		Ribosomal_L28e	6..115	CDD:280030	58/108 (54%)
		Mak16	139..241	CDD:282698	46/103 (45%)
AT1G23280	NP_173742.1	PLN00040	1..300	CDD:215038	143/344 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	148	1.000	Domainoid score	I1443
eggNOG	1	0.900	-	-		E1_COG5129
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	255	1.000	Inparanoid score	I1002
OMA	1	1.010	-	-		QHG54003
OrthoDB	1	1.010	-	-		D1394336at2759
OrthoFinder	1	1.000	-	-		FOG0004909
OrthoInspector	1	1.000	-	-		oto3262
orthoMCL	1	0.900	-	-		OOG6_102084
Panther	1	1.100	-	-	LDO	PTHR23405
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3461
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	13	12.840