DRSC/TRiP Functional Genomics Resources

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Protein Alignment: stg1 and clc-3

Sequence 1:NP_001027082.1 Gene:stg1 FlyBaseID:FBgn0064123 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_001024993.1 Gene:clc-3 WormBaseID:WBGene00000524 Length:222 Species:Caenorhabditis elegans

Alignment Length:75 Identity:18/76 (24%)
Similarity:32/76 (42%) Gaps:14/76 (18%)


  Fly   310 EGYQPDPHDSTAAIPYTVTKSCPIFLAAGVFLVISFIV---------FLIPTCSHQNNLYYFSAG 365
            :||  |.:...:...:..|::..:|:|  :||.||.::         |....|.....|..|..|
 Worm    79 DGY--DMYSERSMYRHLPTQTYEVFVA--LFLAISCMIASTVLLFGPFCCQRCKPSTTLLIFITG 139

  Fly   366 ILFIVSGLVM 375
            : |..||.::
 Worm   140 V-FSGSGCLI 148

Known Domains:


GeneSequenceDomainRegion External IDIdentity
stg1NP_001027082.1 PMP22_Claudin 235..429 CDD:304458 18/76 (24%)
clc-3NP_001024993.1 PMP22_Claudin 1..196 CDD:304458 18/76 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0000191
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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