DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and Dnd1

DIOPT Version :10

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001102849.1 Gene:Dnd1 / 679841 RGDID:1583648 Length:352 Species:Rattus norvegicus


Alignment Length:167 Identity:39/167 - (23%)
Similarity:72/167 - (43%) Gaps:20/167 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ELFLSCIPRN---HSCSPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYL 99
            |:|:..:|::   |.     ::.:...:|.:|..|..:.|||.:||:||.:|.:....::|:..|
  Rat    59 EVFIGRLPQDVYEHQ-----LIPLFQRVGRLYEFRLMMTFSGLNRGFAYARYSSRRGAQAAIATL 118

  Fly   100 -PMRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHPF------TIVRVYEYQLDQ 157
             ..:.|..|..| |..||...||.:..:..||....:   :|.:.|.      |::.........
  Rat   119 HNHQLRPSCQLL-VCRSTEKCELTVDGLPLSLNRRAL---LLALQPLGPCLQETLLLPSPGSAPS 179

  Fly   158 FFYIFEYRNNDSAASAHQR-VRNSIRKFGEHAHISWL 193
            ...:.::..:.:||.|.:. |....|..||...:.||
  Rat   180 QIALLKFSTHRAAAMAKKALVEGQSRLCGEQVAVEWL 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:409695 21/80 (26%)
Dnd1NP_001102849.1 hnRNP-R-Q 18..>219 CDD:273732 39/167 (23%)
DSRM_DND1 254..333 CDD:380745
Blue background indicates that the domain is not in the aligned region.

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