DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and Rbm46

DIOPT Version :10

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001139800.1 Gene:Rbm46 / 633285 MGIID:3645057 Length:533 Species:Mus musculus


Alignment Length:195 Identity:46/195 - (23%)
Similarity:86/195 - (44%) Gaps:33/195 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYL--- 99
            |:|:..|||:  .....:|.|....|::|..|..::|||.:||||::.|...:..:.|::.|   
Mouse    62 EVFVGKIPRD--MYEDELVPVFERAGKIYEFRLMMEFSGENRGYAFVMYTTKEEAQLAIRILNNY 124

  Fly   100 ---PMRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHPFTI-VRVYEYQLDQF-- 158
               |.:|..:|:      |.:|..|.:..:....:..::..||.|:....: |.||....|:.  
Mouse   125 EIRPGKFIGVCV------SLDNCRLFIGAIPKEKKKEEILDEMKKVTEGVVDVIVYPSATDKTKN 183

  Fly   159 --FYIFEYRNNDSAASAHQR-VRNSIRKFGEHAHISWLTAENILSRASGSFCFQREVSQNRTRRV 220
              |...||.::.:||.|.:: :..:.:.:|....:.|...|             :||.:...:||
Mouse   184 RGFAFVEYESHRAAAMARRKLIPGTFQLWGHTIQVDWADPE-------------KEVDEETMQRV 235

  Fly   221  220
            Mouse   236  235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:409695 23/82 (28%)
Rbm46NP_001139800.1 hnRNP-R-Q 5..464 CDD:273732 46/195 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 338..362
Blue background indicates that the domain is not in the aligned region.

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