DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and rbm46

DIOPT Version :10

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001073493.2 Gene:rbm46 / 566042 ZFINID:ZDB-GENE-061013-298 Length:523 Species:Danio rerio


Alignment Length:195 Identity:46/195 - (23%)
Similarity:90/195 - (46%) Gaps:33/195 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYL--- 99
            |:|:..|||:  .....:|.|..:.|.:|..|..::|||.:||||::.|...:..:.|:|.|   
Zfish    59 EVFVGKIPRD--MYEDELVPVFEQAGHIYEFRLMMEFSGENRGYAFVMYTTREKAQRAIQLLDNY 121

  Fly   100 ---PMRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHPFTI-VRVYEYQLDQF-- 158
               |.:|..:|:      |.:|..|.:.::....:..::.:||:|:....: |.||...:|:.  
Zfish   122 EIRPGKFIGVCV------SLDNCRLFIGSIPKDKKKEEIQEEMMKVTEGVMDVIVYPSAVDRMKN 180

  Fly   159 --FYIFEYRNNDSAASAHQR-VRNSIRKFGEHAHISWLTAENILSRASGSFCFQREVSQNRTRRV 220
              |...||.::.:||.|.:: :..:.:.:|....:.|...|             :|:.:...:||
Zfish   181 RGFAFVEYESHKAAAMARRKLIPGTFQLWGHTIQVDWAEPE-------------KELDEETMQRV 232

  Fly   221  220
            Zfish   233  232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:409695 24/82 (29%)
rbm46NP_001073493.2 hnRNP-R-Q 18..431 CDD:273732 46/195 (24%)

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