DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and rbm47

DIOPT Version :10

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:XP_005168416.2 Gene:rbm47 / 562991 ZFINID:ZDB-GENE-030131-9612 Length:601 Species:Danio rerio


Alignment Length:213 Identity:50/213 - (23%)
Similarity:88/213 - (41%) Gaps:48/213 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYL--- 99
            |:|:..|||:  .....:|.|...:|.:|.||..:||.|.:||||::.|......:.|::.|   
Zfish    83 EIFVGKIPRD--VYEDELVPVFESVGRIYEMRLMMDFDGKNRGYAFVMYTQKHEAKRAVRELNNF 145

  Fly   100 ---PMRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHPFTI-VRVYEYQLDQF-- 158
               |.|...:|      .|.:|..|.:..:..:.:..::.:|:.|:....: |.||....|:.  
Zfish   146 EIRPGRLLGVC------SSVDNCRLFIGGIPKTKKREEILEEVSKVTEGVLDVIVYASAADKMKN 204

  Fly   159 --FYIFEYRNNDSAASAHQRVR-NSIRKFGEHAHISWL-------------------------TA 195
              |...||.::.:||.|.:::. ..|:.:|....:.|.                         |:
Zfish   205 RGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMIETS 269

  Fly   196 ENILSRASGSF---CFQR 210
            |.||.:..|.|   |.:|
Zfish   270 EEILRQTFGQFNPGCVER 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:409695 24/82 (29%)
rbm47XP_005168416.2 None

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