DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and Syp

DIOPT Version :10

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001262777.1 Gene:Syp / 42460 FlyBaseID:FBgn0038826 Length:761 Species:Drosophila melanogaster


Alignment Length:167 Identity:36/167 - (21%)
Similarity:80/167 - (47%) Gaps:12/167 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GKG-ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKID-FSGNSRGYAYLQYINVDLKESAMQ 97
            |.| |:|...||::  .....::.:....|.::.:|..:| .:|.:||||::.:.|.:...:|::
  Fly   203 GNGCEVFCGKIPKD--MYEDELIPLFENCGIIWDLRLMMDPMTGTNRGYAFVTFTNREAAVNAVR 265

  Fly    98 YLPMRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHP--FTIVRVY----EYQLD 156
            .|.....:....:.|..|.||..|.:.|:..:....::.:|..|..|  :.:: :|    :.:.:
  Fly   266 QLNDFEIRTGKKIGVTISFNNHRLFVGNIPKNRDRDELIEEFSKHAPGLYEVI-IYSSPDDKKKN 329

  Fly   157 QFFYIFEYRNNDSAASAHQRV-RNSIRKFGEHAHISW 192
            :.|...||.::.:|:.|.:|: ...|:.:|....:.|
  Fly   330 RGFCFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDW 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:409695 17/80 (21%)
SypNP_001262777.1 NURR_Syncrip-like 68..150 CDD:410953
hnRNP-R-Q 153..>563 CDD:273732 36/167 (22%)
Blue background indicates that the domain is not in the aligned region.

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