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Protein Alignment tut and dnd1

DIOPT Version :9

Sequence 1:	NP_729346.1	Gene:	tut / 317996	FlyBaseID:	FBgn0052364	Length:	230	Species:	Drosophila melanogaster
Sequence 2:	NP_997960.1	Gene:	dnd1 / 373074	ZFINID:	ZDB-GENE-030828-4	Length:	411	Species:	Danio rerio

Alignment Length:	102	Identity:	34/102 - (33%)
Similarity:	53/102 - (51%)	Gaps:	13/102 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    35 GKG-ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAM-- 96
            |.| |:|:|.|| |.....| ::.:...:|.:|..|..::|||.:||:||.:|.:.....:|:
Zfish    57 GSGCEVFISQIP-NDVYEDR-LIPLFQSIGTIYEFRLMMNFSGQTRGFAYAKYGDPLTASAAVTT 119

  Fly    97 --QY-LPMRFRQLCMCLRVEPSTNNRELVLKNVESSL 130
              || ||..     .||.|..||..|:|.|.::..|:
Zfish   120 LHQYRLPEG-----GCLTVRRSTEKRQLRLGDLPVSM 151

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
tut	NP_729346.1	RRM1_hnRNPR_like	36..115	CDD:409695	27/84 (32%)
dnd1	NP_997960.1	RRM_SF	59..136	CDD:473069	27/83 (33%)
		RRM_SF	138..220	CDD:473069	4/14 (29%)
		DSRM_DND1	324..403	CDD:380745
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-
Hieranoid	0	0.000	Not matched by this tool.