DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and dnd1

DIOPT Version :10

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_997960.1 Gene:dnd1 / 373074 ZFINID:ZDB-GENE-030828-4 Length:411 Species:Danio rerio


Alignment Length:102 Identity:34/102 - (33%)
Similarity:53/102 - (51%) Gaps:13/102 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GKG-ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAM-- 96
            |.| |:|:|.|| |.....| ::.:...:|.:|..|..::|||.:||:||.:|.:.....:|:  
Zfish    57 GSGCEVFISQIP-NDVYEDR-LIPLFQSIGTIYEFRLMMNFSGQTRGFAYAKYGDPLTASAAVTT 119

  Fly    97 --QY-LPMRFRQLCMCLRVEPSTNNRELVLKNVESSL 130
              || ||..     .||.|..||..|:|.|.::..|:
Zfish   120 LHQYRLPEG-----GCLTVRRSTEKRQLRLGDLPVSM 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:409695 27/84 (32%)
dnd1NP_997960.1 RRM_SF 59..136 CDD:473069 27/83 (33%)
RRM_SF 138..220 CDD:473069 4/14 (29%)
DSRM_DND1 324..403 CDD:380745
Blue background indicates that the domain is not in the aligned region.

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