DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and Rbm47

DIOPT Version :10

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001005882.1 Gene:Rbm47 / 305340 RGDID:1359713 Length:590 Species:Rattus norvegicus


Alignment Length:213 Identity:49/213 - (23%)
Similarity:88/213 - (41%) Gaps:48/213 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYL--- 99
            |:|:..|||:  .....:|.|...:|.:|.:|..:||.|.:||||::.|.:....:.|::.|   
  Rat    72 EVFVGKIPRD--VYEDELVPVFETVGRIYELRLMMDFDGKNRGYAFVMYCHKHEAKRAVRELNNY 134

  Fly   100 ---PMRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHPFTI-VRVYEYQLDQF-- 158
               |.|...:| |     |.:|..|.:..:....:..::.:|:.|:....: |.||....|:.  
  Rat   135 EIRPGRLLGVC-C-----SVDNCRLFIGGIPKMKKRGEILEEIAKVTEGVLNVIVYASAADKMKN 193

  Fly   159 --FYIFEYRNNDSAASAHQRVR-NSIRKFGEHAHISWL-------------------------TA 195
              |...||.::.:||.|.:::. ..|:.:|....:.|.                         |.
  Rat   194 RGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMQTVKILYVRNLMIETT 258

  Fly   196 ENILSRASGSF---CFQR 210
            |..:.|:.|.|   |.:|
  Rat   259 EETIKRSFGQFNPGCVER 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:409695 24/82 (29%)
Rbm47NP_001005882.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
hnRNP-R-Q 11..590 CDD:273732 49/213 (23%)
Blue background indicates that the domain is not in the aligned region.

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