DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and A1CF

DIOPT Version :10

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001185748.1 Gene:A1CF / 29974 HGNCID:24086 Length:602 Species:Homo sapiens


Alignment Length:208 Identity:50/208 - (24%)
Similarity:89/208 - (42%) Gaps:54/208 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LKSLLDEGKG--------------------ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKI 72
            |::||::..|                    |:|:..:||:  .....::.:..::|::|.||..:
Human    35 LQTLLEKENGQRKYGGPPPGWDAAPPERGCEIFIGKLPRD--LFEDELIPLCEKIGKIYEMRMMM 97

  Fly    73 DFSGNSRGYAYLQYIN-VDLKESAMQ---YLPMRFRQLCMCLRVE---------PSTNNRELVLK 124
            ||:||:||||::.:.| |:.|.:..|   |.....|.|.:|..|:         |.|..||    
Human    98 DFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKRE---- 158

  Fly   125 NVESSLRPWQVYQEMLKIHPFTI-VRVYEYQLDQF----FYIFEYRNNDSAASAHQR-VRNSIRK 183
                     ::..||.|:....: |.||....|:.    |...||.::.:||.|.:: :...|:.
Human   159 ---------EILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYESHRAAAMARRKLLPGRIQL 214

  Fly   184 FGEHAHISWLTAE 196
            :|....:.|...|
Human   215 WGHGIAVDWAEPE 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:409695 26/111 (23%)
A1CFNP_001185748.1 hnRNP-R-Q 29..602 CDD:273732 50/208 (24%)

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