DRSC/TRiP Functional Genomics Resources

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Protein Alignment: tut and hrp-2

Sequence 1:NP_729346.1 Gene:tut FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_493049.2 Gene:hrp-2 WormBaseID:WBGene00002000 Length:611 Species:Caenorhabditis elegans

Alignment Length:250 Identity:52/250 (21%)
Similarity:101/250 (40%) Gaps:73/250 (29%)


  Fly     4 ESKYCTSQV---------NGTITITTRKVLD----ENLKSLLD---------------------- 33
            :|.|.||.:         .|...:|:.|:::    ..||:||:                      
 Worm   124 KSLYVTSLIRSFKDRCRQQGAAAVTSGKLINGPELAALKNLLETTGYTIEVTIGQRKFGGPPPDW 188

  Fly    34 -------EGKG-ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKID-FSGNSRGYAYLQYIN- 88
                   .|:| |:::..||.:  .....:|.:..:.|:::.:|..:| .||.|||||::.|.| 
 Worm   189 EGPATGPAGQGHEIYVGHIPTD--VFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNK 251

  Fly    89 VDLKESAMQY--------LPMRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHPF 145
            .|...:|..|        .|         |:|..|..|..|.:.|:..:....::.:| ||.|..
 Worm   252 EDAAAAAKTYDGHEISTGKP---------LKVNVSIANTRLFIGNIPKTKSKDEILEE-LKTHAE 306

  Fly   146 TIVRVYEYQL-------DQFFYIFEYRNNDSAASAHQRV-RNSIRKFGEHAHISW 192
            .:|.|..|.:       ::.|...::.::.:|:...::: ::.||.|....::.|
 Worm   307 GVVDVIVYSVPDNEKIKNRGFCFVDFIDHKTASDIKRKIAQHKIRPFNADVYVDW 361

Known Domains:


GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:240695 23/90 (26%)
DUF3388 <127..169 CDD:288701 8/49 (16%)
hrp-2NP_493049.2 RRM1_hnRNPR_like 199..277 CDD:240695 23/89 (26%)
RRM2_hnRNPR_like 280..362 CDD:240696 16/83 (19%)
RRM3_hnRNPR_like 376..445 CDD:240697
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.750 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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