DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and HNRNPR

DIOPT Version :10

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:XP_047280655.1 Gene:HNRNPR / 10236 HGNCID:5047 Length:661 Species:Homo sapiens


Alignment Length:202 Identity:48/202 - (23%)
Similarity:93/202 - (46%) Gaps:34/202 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TITITT--RKV---LDENLKSLLDEGKG-ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKID 73
            |:.:||  ||.   ..:::.|.:..|.| |:|:..|||:  .....:|.:..:.|.::.:|..:|
Human   162 TLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRD--LYEDELVPLFEKAGPIWDLRLMMD 224

  Fly    74 -FSGNSRGYAYLQYINVDLKESAMQYLPMRFRQLCMCLRVEP--------STNNRELVLKNVESS 129
             .||.:||||::.:..   ||:|.:.:     :||....:.|        |..|..|.:.::..:
Human   225 PLSGQNRGYAFITFCG---KEAAQEAV-----KLCDSYEIRPGKHLGVCISVANNRLFVGSIPKN 281

  Fly   130 LRPWQVYQEMLKIHPFT--IVRVYEY------QLDQFFYIFEYRNNDSAASAHQRVRN-SIRKFG 185
            .....:.:|..|:...|  :|.|..|      :.::.|...||.::.|||.|.:|:.: .::.:|
Human   282 KTKENILEEFSKVTGLTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWG 346

  Fly   186 EHAHISW 192
            ....:.|
Human   347 NVVTVEW 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:409695 22/88 (25%)
HNRNPRXP_047280655.1 NURR_hnRNPR 52..135 CDD:410955
hnRNP-R-Q 131..656 CDD:273732 48/202 (24%)
Blue background indicates that the domain is not in the aligned region.

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